Pairwise Alignments

Query, 435 a.a., High-affinity branched-chain amino acid transport system permease protein BraE from Pseudomonas putida KT2440

Subject, 495 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  310 bits (793), Expect = 8e-89
 Identities = 208/475 (43%), Positives = 266/475 (56%), Gaps = 85/475 (17%)

Query: 22  SLLETIVAGLLALIVFGPVVGV---------VLDGYTFNAEPRRVAWLVGGVMVGRFLLS 72
           +L + +V+GLL  ++F P+VG          ++  Y F      VA   G VMVGRFLL 
Sbjct: 35  ALKDALVSGLLTALLFLPLVGFRASESSTGSLVLTYRFGL----VAIFAGIVMVGRFLLM 90

Query: 73  LFL----------QTAPGQRMLLGFDSGGSGVHVTAPDYKSRLRYIIPALIVIAIVFPIF 122
           + +           T PG  + LG         + +P  K       P     AI++P  
Sbjct: 91  VTVWNPNRPPRRVSTTPGVMVRLGA--------LASPAVK-------PVFFSFAILYPFL 135

Query: 123 A---------NKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGY 173
           +         ++Y + + I  L YV+LG GLNIVVGLAGLLDLGYVAFYA+GAY  AL  
Sbjct: 136 SILLAGGLSPSRYWVDLGIYVLTYVMLGWGLNIVVGLAGLLDLGYVAFYAVGAYTFALLS 195

Query: 174 QYLGLG----------------FWSVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGF 217
             + +                 FW  LPL+ I AA+ G ILGFPVLR+ GDYLAIVTL F
Sbjct: 196 TSVPINDFFAGTLGDDFWTAWAFWICLPLSGILAAMWGVILGFPVLRLRGDYLAIVTLAF 255

Query: 218 GEIIRLVLNNWLSFTGGPNGMPAPSP-TFFGLEFGRRAKDGGVPIHEFFGFEYNASLKFV 276
           GEIIRLVL NW+S T G  G+ +  P TFFG+ F   ++ G   I   FG E+N+  +  
Sbjct: 256 GEIIRLVLINWVSLTNGGAGISSIPPITFFGVPFDS-SETGFASI---FGLEFNSMHRMF 311

Query: 277 FIYAVLFMVVLAVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTLGAST 336
           F+Y V+  +      +  RL +MPVGRAWEALREDEIACRS+G+N  L KL+AF  GA  
Sbjct: 312 FLYFVILGLAALTAVVTIRLRKMPVGRAWEALREDEIACRSLGINTTLTKLTAFATGAMF 371

Query: 337 AGLAGVFFATYQGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSF 396
            G AG FFA    FV+P SFTF ESA+ILAIVVLGGMGS +GV  AA +L    ELLR+ 
Sbjct: 372 GGFAGAFFAVRIRFVSPESFTFMESAVILAIVVLGGMGSQMGVAGAAILLIGGMELLRNL 431

Query: 397 ---------------SEYRVLLFGVLMVLMMIWRPRGLI--RISRTGVTPRKGVA 434
                          S YR+L+FG  MV +M+WRPRGL+  R+    +  RK V+
Sbjct: 432 SFLKADFLFGSDFDPSLYRMLIFGFAMVAVMVWRPRGLVSSRMPTIFLKERKAVS 486