Pairwise Alignments

Query, 435 a.a., High-affinity branched-chain amino acid transport system permease protein BraE from Pseudomonas putida KT2440

Subject, 333 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  166 bits (420), Expect = 1e-45
 Identities = 98/321 (30%), Positives = 164/321 (51%), Gaps = 26/321 (8%)

Query: 103 SRLRYIIPALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFY 162
           +RL  +  AL  +  V P   N Y +++  L LI ++L   LN+++G  G + L +  F+
Sbjct: 25  ARLALVWLALAAVPFVVP---NAYWISLANLALINLVLIASLNLLMGYGGQISLAHAGFF 81

Query: 163 AIGAYGLALGYQYLGLGFWSVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIR 222
            +GAY   +     GL  W+ LP AA+ A L   ++G P LR+ G YLA+ TLG+  I+ 
Sbjct: 82  GLGAYASGILNVRYGLPPWAGLPAAAVVAGLGALLIGIPALRLRGHYLAMATLGWNAILV 141

Query: 223 LVLNNWLSFTGGPNGMPAPSP-TFFGLEFGRRAKDGGVPIHEFFGFEYNASLKFVFIYAV 281
           +     +  TGGPNG+    P + FG      AK                   F   +AV
Sbjct: 142 VFFTQLVGLTGGPNGLLGVEPFSIFGHALDTEAK------------------AFPLAWAV 183

Query: 282 LFMVVLAVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGLAG 341
            F+V+LA+      L    +GR+  A+  +E+  +S+G+     KL+ F L A  AG+AG
Sbjct: 184 AFLVMLAI----SNLLASRIGRSIRAVATNELGAQSLGIGSFRTKLAVFVLSAGMAGIAG 239

Query: 342 VFFATYQGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEYRV 401
             +     + +P +F    S ++L +V +GG G+  G ++ A + T  P++L  + +  +
Sbjct: 240 SLYVHINQYASPETFGIAPSIMLLVMVAIGGAGTFYGPMLGALIYTAVPQILLDYEDAEL 299

Query: 402 LLFGVLMVLMMIWRPRGLIRI 422
           +LFG+ +++++I  PRGL  I
Sbjct: 300 MLFGLGLLVVLILFPRGLAGI 320