Pairwise Alignments

Query, 435 a.a., High-affinity branched-chain amino acid transport system permease protein BraE from Pseudomonas putida KT2440

Subject, 306 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  147 bits (372), Expect = 3e-40
 Identities = 102/307 (33%), Positives = 153/307 (49%), Gaps = 34/307 (11%)

Query: 126 YLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYQYLGLGFWSVLP 185
           YL+TV+IL  I  L+GL LN+  GLAGL++ G   F A+GAY LA+   ++G  + + L 
Sbjct: 4   YLVTVIILVAIAALVGLALNLQWGLAGLVNFGVAGFVALGAYTLAISAPHVG--WLAGLA 61

Query: 186 LAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLSFTGGPNGMPAPSPTF 245
           LAA   A    +L    +R+  +YLAIVT+GF EI+R++L N    TGG  G+      F
Sbjct: 62  LAAAVCAGLSMLLSLLTIRLEENYLAIVTIGFAEIVRILLLNLGDLTGGALGIADIPRPF 121

Query: 246 FGLEFGRRAKDGGVPIHEFFGFEYNASLKFVFIYAVLFMVVLAVLYIKHRLTRMPVGRAW 305
            G+                      A      I A    +V+ V      L R P GRA 
Sbjct: 122 AGVT--------------------PAGWGDAVILAFALGLVVIVFAFSEALVRSPFGRAL 161

Query: 306 EALREDEIACRSMGLNHVLVKLSAFTLGASTAGLAGVFFATYQGFVNPSSFTFFESALIL 365
            A+R+D  A  ++G   + +++ AF +G +  GLAG   A +  +++PS FT   +A   
Sbjct: 162 RAVRDDATAAAALGKPVLALRVRAFAIGGAIMGLAGALHAFFLTYIDPSQFTPIITAYAF 221

Query: 366 AIVVLGGMGSTVGVVIAAFVLTVAPELLR------------SFSEYRVLLFGVLMVLMMI 413
             V+ GG GS +G+V+ A  + +  E  R              S  R+ + GV +VL++I
Sbjct: 222 MAVIAGGRGSNLGLVLGAGSIMLILEATRFLKDVIPGIDGVQLSALRLGMIGVGIVLLLI 281

Query: 414 WRPRGLI 420
            RP GL+
Sbjct: 282 LRPEGLV 288



 Score = 26.2 bits (56), Expect = 0.001
 Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 8/56 (14%)

Query: 30 GLLALIVFGPVVGVVLDGYTFNAEPRRVAWLVGGVMVGRFLLSLFLQTAPGQRMLL 85
          GL  L+ FG    V L  YT       V WL G        L+L      G  MLL
Sbjct: 27 GLAGLVNFGVAGFVALGAYTLAISAPHVGWLAG--------LALAAAVCAGLSMLL 74