Pairwise Alignments

Query, 435 a.a., High-affinity branched-chain amino acid transport system permease protein BraE from Pseudomonas putida KT2440

Subject, 347 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  164 bits (416), Expect = 3e-45
 Identities = 106/328 (32%), Positives = 162/328 (49%), Gaps = 37/328 (11%)

Query: 112 LIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLAL 171
           L+   ++ P   N+Y L +  L  I V    GLNI+ G  GL+ LG  AF A+GAY +A 
Sbjct: 29  LLATLVLAPFVLNQYWLYLACLVAINVASATGLNILTGYTGLVSLGQAAFMAVGAYTVAF 88

Query: 172 GYQYLGLGFWSVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLSF 231
               +G  F   +  A + +AL G ++G P LR+ G YLAI T+    I+  V  +W+S 
Sbjct: 89  FEGQVGTPFLLNILAAGLVSALVGVLVGIPSLRVKGLYLAIATIAASVILHFVFTHWVSV 148

Query: 232 TGGPNGMPAPSPTFFGLEFGRRAKDGGVPIHEFFGFEYNASLKFVFIYAVLFMVVLAVLY 291
           TGG  G+       FGLE                      +L FV +     MV+ A   
Sbjct: 149 TGGVRGINVVPARLFGLELAS-----------------PFALYFVIVPITCLMVLGAA-- 189

Query: 292 IKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGLAGVFFATYQGFV 351
               L R  +GRA+ A+R+ +I+   +G+  +  KL +F L +  AG+AG  +A +   V
Sbjct: 190 ---NLFRTRIGRAFIAIRDRDISAEVLGIPLLRYKLMSFALSSFYAGVAGGMWAYFFRVV 246

Query: 352 NPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLR---------------SF 396
            P SF F  S   LA V++GG+G+ +G V+ A  +T+ PELL+               + 
Sbjct: 247 TPESFPFATSIFFLAAVIVGGLGTIIGSVLGAAFMTLVPELLKYVVDWLAPIFPNAGAAL 306

Query: 397 SEYRVLLFGVLMVLMMIWRPRGLIRISR 424
           S  R ++FG L++L +++ P GL  + R
Sbjct: 307 SPVRTIVFGALIILFLVFEPHGLAEMVR 334