Pairwise Alignments

Query, 435 a.a., High-affinity branched-chain amino acid transport system permease protein BraE from Pseudomonas putida KT2440

Subject, 648 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) / ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  166 bits (420), Expect = 2e-45
 Identities = 103/337 (30%), Positives = 176/337 (52%), Gaps = 30/337 (8%)

Query: 102 KSRLRYIIPALIVIA--IVFPI-FANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGY 158
           K +  +++ A+  +A  ++FPI   N Y + ++   +IY +L  GL+IVVG  G + LG+
Sbjct: 7   KMKTSHLLLAIAGVAALLLFPIGIDNPYYIHLLETIMIYAILLFGLDIVVGYTGQVSLGH 66

Query: 159 VAFYAIGAYGLALGYQYLGLGFWSVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFG 218
              + +GAY   +    L   FW  +P A +  A  G +L  P LR+ G YLA+VTL FG
Sbjct: 67  AGLFGLGAYAAGVLVFKLSAPFWITVPFAIVFTAGFGALLALPALRVSGPYLAMVTLAFG 126

Query: 219 EIIRLVLNNWLSFTGGPNGMPAPSPTFFGLEFGRRAKDGGVPIHEFFGFEYNASLKFVFI 278
            II++++N     T GP G+    P+ FG +   R                    ++ ++
Sbjct: 127 TIIQILINEMSFLTDGPMGIKLEKPSLFGHKLDDR--------------------EYYWV 166

Query: 279 YAVLFMVVLAVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAG 338
            AVL ++ L V+   HR+ R  +GRA+EALR   +A   MG++    K+ AF + A  AG
Sbjct: 167 VAVLMVLALVVV---HRILRSHLGRAFEALRGSPVASDCMGVSVYRYKVYAFVISAGFAG 223

Query: 339 LAGVFFATYQGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSE 398
           LAG  +A  + +++P+S+ F  + L L  V++GG  S +G ++ A ++ + P+LL     
Sbjct: 224 LAGSLYAYSEQYISPNSYNFELTVLFLLAVIMGGRKSRIGSMLGATIIVLLPKLLDDVVL 283

Query: 399 YRVLLFGVLMVLMMIWRPRGLIRISRTGVTPRKGVAP 435
           +R +  G+ + +++      ++ I R   TP +   P
Sbjct: 284 FRYVSVGLAVAVLV----AAVVAIRRQRATPGQMAIP 316