Pairwise Alignments

Query, 435 a.a., High-affinity branched-chain amino acid transport system permease protein BraE from Pseudomonas putida KT2440

Subject, 402 a.a., Branched-chain amino acid ABC transporter, permease protein LivM (TC 3.A.1.4.1) from Variovorax sp. SCN45

 Score =  242 bits (618), Expect = 1e-68
 Identities = 159/371 (42%), Positives = 216/371 (58%), Gaps = 49/371 (13%)

Query: 102 KSRLRYIIPALIVIAIVFPI-FANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVA 160
           K+   YI+ A+ V+A+   +       + +  + L+YVLL LGLNIVVG AGLLDLGYVA
Sbjct: 5   KNLALYIVGAIAVLALPLLLQMQGNAWVRIADIALLYVLLALGLNIVVGYAGLLDLGYVA 64

Query: 161 FYAIGAYGLAL-GYQYLGLGF-WS--------------VLPLAAIAAALAGCILGFPVLR 204
           F+A+GAY  AL G  +L   F W               V+PLA + A   G +LG P L+
Sbjct: 65  FFAVGAYLFALMGSSHLTETFPWFAQMFPNGMHTSLLIVIPLALVVAGCLGVLLGAPTLK 124

Query: 205 MHGDYLAIVTLGFGEIIRLVLNNW---LSFTGGPNGMPA-PSPTFFGLEFGRRAKDGGVP 260
           + GDYLAIVTLGFGEIIR+ LNN    ++ T GP G+ A  S  F+GL+ G+  K     
Sbjct: 125 LRGDYLAIVTLGFGEIIRVFLNNLDQPVNITNGPKGITAIDSIKFWGLDLGKAWK----- 179

Query: 261 IHEFFGFEYNASLKFVFIYAVLFM-VVLAVLYIKHRLTRMPVGRAWEALREDEIACRSMG 319
              F GF    ++  V +Y  LF+ +V+A + I HRL    +GRAW A+REDEIA ++MG
Sbjct: 180 ---FDGF----TISSVSLYYYLFLALVVATVIISHRLQTSRIGRAWMAIREDEIAAKAMG 232

Query: 320 LNHVLVKLSAFTLGASTAGLAGVFFATYQGFVNPSSFTFFESALILAIVVLGGMGSTVGV 379
           +N   +KL AF +GAS  G++G  FA +QGFV+P SF+  ES +I+A+VVLGG+G   GV
Sbjct: 233 INTRNMKLLAFGMGASFGGVSGAMFAAFQGFVSPESFSLMESVMIVAMVVLGGIGHLPGV 292

Query: 380 VIAAFVLTVAPELLR--------------SFSEYRVLLFGVLMVLMMIWRPRGLIRISRT 425
           ++ A +L   PE+LR                S  R L   + M+++M+ RPRGL      
Sbjct: 293 ILGAVLLAALPEVLRYVAGPLQAATDGRLDASILRQLFIALAMIVIMLLRPRGLWPSPEH 352

Query: 426 GVT-PRKGVAP 435
           G T  RKG  P
Sbjct: 353 GKTLARKGGVP 363