Pairwise Alignments

Query, 435 a.a., High-affinity branched-chain amino acid transport system permease protein BraE from Pseudomonas putida KT2440

Subject, 600 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  152 bits (383), Expect = 4e-41
 Identities = 95/311 (30%), Positives = 160/311 (51%), Gaps = 23/311 (7%)

Query: 111 ALIVIAIVFPI-FANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGL 169
           A ++ A+  P+ F   ++L +     + +L+ +GLN++ G AG + LG+ A  A+G+Y  
Sbjct: 26  AAVLAALSLPLWFRGDFILFMATQAGVMMLVAIGLNLLTGYAGQVSLGHGALVAVGSYTT 85

Query: 170 ALGYQYLGLGFWSVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWL 229
           AL        FW         + LAG ++  P LR+   Y A+VTL F +++  +L  W 
Sbjct: 86  ALLMIDAHWSFWLAALAGMAVSTLAGLVMALPALRLSTWYFALVTLTFAQVVTDLLVEWR 145

Query: 230 SFTGGPNGMPAPSPTFFGLEFGRRAKDGGVPIHEFFGFEYNASLKFVFIYAVLFMVVLAV 289
           S T G +G+    P   G         G V ++                 AV   VVLA 
Sbjct: 146 SLTRGFSGLVGIPPPAIGAHVL-----GPVEVY----------------LAVAACVVLAF 184

Query: 290 LYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGLAGVFFATYQG 349
           L +++ L+R   GR   A R++ +A  + G++ + +KL AF + A+ AGLAG F+A  + 
Sbjct: 185 LGVRN-LSRSRYGRGMVAARDNPLAATASGVSLLRIKLFAFAVSAALAGLAGAFYAVQKT 243

Query: 350 FVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEYRVLLFGVLMV 409
            + P  FT   S   L I+V+GG+G   G V+   V  + PELL     +R+L++GV+++
Sbjct: 244 VITPEDFTADFSIFFLLIIVVGGLGRLWGPVVGTLVFFLLPELLGPLQSWRLLIYGVVLL 303

Query: 410 LMMIWRPRGLI 420
           ++M++ P G++
Sbjct: 304 VLMVFAPHGIM 314