Pairwise Alignments

Query, 435 a.a., High-affinity branched-chain amino acid transport system permease protein BraE from Pseudomonas putida KT2440

Subject, 346 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  160 bits (404), Expect = 7e-44
 Identities = 107/328 (32%), Positives = 162/328 (49%), Gaps = 40/328 (12%)

Query: 111 ALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLA 170
           A ++     P++ + Y+L +  +  I+V+  LGLN+  G AGL+ L + AF  +G Y +A
Sbjct: 28  AFVLSLFTLPLWGSDYVLAMACIVGIHVIAALGLNLTTGNAGLISLSHGAFIGVGCYTVA 87

Query: 171 -LGYQYLGLGFWSVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWL 229
            LG Q  G+ F+  LP+A   AA  G I+G P LR+ G YLAI TL    I+      W 
Sbjct: 88  WLGKQ--GVPFYIALPVAGFVAAFLGVIVGLPSLRVKGLYLAIATLAAHFILSFAFREWD 145

Query: 230 SFTGGPNGMPAPSPTFFGLEFGRRAKDGGVPIHEFFGFEYNASLKFVFIYAVLFMVVLAV 289
           + TGG +G   P    FG E                G   N  L FV  +A   M V A 
Sbjct: 146 AVTGGVSGTSIPRANLFGFEL--------------VGDRRNFYLIFVCAFA---MAVAA- 187

Query: 290 LYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGLAGVFFATYQG 349
                 L R  +GRA+ A+R+ +I+   +G++ +  KL+AF +GA  AG+AG     + G
Sbjct: 188 ----RNLARTHIGRAFVAVRDRDISAEILGVHLLRTKLTAFAIGAFYAGVAGGLLGYFYG 243

Query: 350 FVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEYR--------- 400
            + P  F    S   LA V++GG+G+ +G V+ A  +T  PE LR  +            
Sbjct: 244 SITPDYFVLTLSVFYLAAVIVGGLGTVLGSVLGAVFMTFVPEGLRLLASVSSQAFPGVAG 303

Query: 401 ------VLLFGVLMVLMMIWRPRGLIRI 422
                  ++FG+L+++ +I+ P GL  I
Sbjct: 304 LLLPMGQVVFGLLIIVFLIFEPHGLAAI 331