Pairwise Alignments

Query, 435 a.a., High-affinity branched-chain amino acid transport system permease protein BraE from Pseudomonas putida KT2440

Subject, 284 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  159 bits (402), Expect = 1e-43
 Identities = 104/294 (35%), Positives = 158/294 (53%), Gaps = 30/294 (10%)

Query: 126 YLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYQYLGLGFWSVLP 185
           Y  +++ L  I V+L L LN++ GL G + LG+ AF+ +GAY  AL     G   W  LP
Sbjct: 4   YETSILTLVAINVILALSLNLISGLCGQVSLGHAAFFGVGAYATAL-LAKAGANLWLTLP 62

Query: 186 LAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLSFTGGPNGMPAPSPTF 245
            A + A + G ++GF  LR+  D+LAI T+  G +                        F
Sbjct: 63  AALLLAGVCGLVVGFCSLRVRDDFLAIATMAAGFL------------------------F 98

Query: 246 FGLEFGRRAKDGGVPIHEFFGFEYNASLKFVFIYAVLFMVVLAVLYIKHRLTRMPVGRAW 305
            G+     A  G + I +       + L+  + Y V+   V A ++    + +  +G A+
Sbjct: 99  LGVVRTSDALGGELGISQI----PESGLEGFYPYFVVLCAVAAGVFCTW-VKKSWLGYAF 153

Query: 306 EALREDEIACRSMGLNHVLVKLSAFTLGASTAGLAGVFFATYQGFVNPSSFTFFESALIL 365
           EA+  DE A RS+G++    KL+AF LG   AG+AG  +A Y G V   +F F  S +IL
Sbjct: 154 EAVSADETAARSLGIDTPRFKLAAFALGTGLAGVAGCLYAYYLGTVGVEAFGFPVSVMIL 213

Query: 366 AIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEYRVLLFGVLMVLMMIWRPRGL 419
           A+VV+GGMGS  G V+AA +LT+APE  R  ++Y++L+FG+L+ +MM + P GL
Sbjct: 214 AMVVIGGMGSIWGSVLAAALLTLAPEWFRFINDYKLLVFGLLLFVMMRFVPGGL 267