Pairwise Alignments

Query, 435 a.a., High-affinity branched-chain amino acid transport system permease protein BraE from Pseudomonas putida KT2440

Subject, 596 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) / ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  151 bits (381), Expect = 6e-41
 Identities = 98/311 (31%), Positives = 152/311 (48%), Gaps = 25/311 (8%)

Query: 111 ALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLA 170
           A  +IA+V  +F N Y L +  +  +Y L   G+N++VG AG   LG    +A GAYG+A
Sbjct: 14  AAALIAVV-SMFGNDYYLRIAFMMCVYYLCAAGMNVLVGYAGQKSLGQAGLFAAGAYGVA 72

Query: 171 LGYQYLGLGFWSVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLS 230
           L      +  W  L LAA+ + L G ++  P LR+ G YLA+VTL FG ++  ++  W  
Sbjct: 73  LLTSRTDMDPWLALALAAVISGLCGVLIALPSLRVKGPYLAMVTLAFGIVVEKLVGEWTD 132

Query: 231 FTGGPNGMPAPSPTFFGLEFGRRAKDGGVPIHEFFGFEYNASLKFVFIYAVLFMVVLAVL 290
             GG  G+    P  +           G P+                 + +L +V+ A L
Sbjct: 133 VFGGAQGIYGIRPLTW----------KGAPLD-------------TTQWVILGIVLCAAL 169

Query: 291 YIKHR-LTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGLAGVFFATYQG 349
           ++  R L     GRA  +L+ DEIA  S+G+     K+ AF + A T G+AG   A    
Sbjct: 170 HLLLRNLLGGRFGRALLSLQADEIASSSVGVRVYRAKVMAFVVAAVTCGIAGALVAQQNQ 229

Query: 350 FVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEYRVLLFGVLMV 409
           ++N    TF  S  IL +V+ GG GS  G ++ A +LT+   LL  +   +  L+G L++
Sbjct: 230 YINSDFITFHLSIFILLLVLFGGAGSMYGPLVGAVLLTLTDALLARWPSAQHFLYGFLLL 289

Query: 410 LMMIWRPRGLI 420
             +   P G++
Sbjct: 290 FALYVMPGGVV 300