Pairwise Alignments

Query, 435 a.a., High-affinity branched-chain amino acid transport system permease protein BraE from Pseudomonas putida KT2440

Subject, 618 a.a., ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score =  137 bits (346), Expect = 7e-37
 Identities = 92/334 (27%), Positives = 157/334 (47%), Gaps = 33/334 (9%)

Query: 90  GGSGVHVTAPDYKSRLRYIIPALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVG 149
           GG GV         R R +  A +V+ +  P+    Y L+V    LI+ L    L+ ++G
Sbjct: 296 GGGGVERPIRPLTQRGRNVAFAGLVVLLALPMVGGSYGLSVASEVLIFALFAASLHFMMG 355

Query: 150 LAGLLDLGYVAFYAIGAYGLALGYQYLGLGFWSVLPLAAIAAALAGCILGFPVLRMHGDY 209
             G++  G+ A++ +G+YG AL  +Y G+   + L    + AA A  + G+  +R+ G Y
Sbjct: 356 TGGMVSFGHAAYFGLGSYGAALMVKYFGIPMLAALVTGPLLAAAAALVFGWFCVRLAGAY 415

Query: 210 LAIVTLGFGEIIRLVLNNWLSFTGGPNGM----PAPSPTFFGLEFGRRAKDGGVPIHEFF 265
           LA++TL F +I   V+  W SFTGG NG+    PAP                        
Sbjct: 416 LAMLTLAFAQIAYAVVFQWSSFTGGDNGLIGIWPAPW----------------------- 452

Query: 266 GFEYNASLKFVFIYAVLFMVVLAVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLV 325
                A+    F Y  L +    +L ++ R+T  P G    A R+  +   S+G+N    
Sbjct: 453 -----AANPVAFYYLTLALCGGGILAVR-RITFAPFGYTLRACRDSALRADSIGINLSSH 506

Query: 326 KLSAFTLGASTAGLAGVFFATYQGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFV 385
           + + F L    AG+AG  +A  +G V P + +   S   L +V+LGG+ +  G V+ A V
Sbjct: 507 RWAGFALAGFFAGIAGSLYAFLKGSVFPDTISIATSVDGLVMVLLGGVQTLTGPVVGALV 566

Query: 386 LTVAPELLRSFSEYRVLLFGVLMVLMMIWRPRGL 419
                  + S+++      GV+++++++  P+G+
Sbjct: 567 YKTLHVTISSYTDQWRTALGVIIIVLVVAFPQGI 600



 Score = 85.9 bits (211), Expect = 3e-21
 Identities = 78/289 (26%), Positives = 135/289 (46%), Gaps = 28/289 (9%)

Query: 139 LLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYQYLG----LGFWSVLPLAAIAAALA 194
           L+  GL+I+ G++ +++  + +FY +GAY      Q L      GFW  + LAA A AL 
Sbjct: 20  LVASGLSIIFGVSRIVNFAHGSFYMLGAYMAFTLVQKLSGGTVFGFWGAIVLAAAAVALV 79

Query: 195 GCILGFPVLRM--HGDYLAIVTLGFGEIIRLVLNNWLSFTGGPNGMPAPSPTFFGLEFGR 252
           G ++   +LR       L  +   FG +  L++ + +    GP  +  P     GL+   
Sbjct: 80  GAVVEMVLLRRIYQAPELLQLLATFGLV--LIVQDLVLVLWGPEDLLGPRAP--GLK--- 132

Query: 253 RAKDGGVPIHEFFGFEYNASLKFVFIYAVLFMVVLAVLYIKHRLTRMPVGRAWEALREDE 312
               G + I   FG  +    ++ F+  +L  VVL +L++    TR   G    A  +D 
Sbjct: 133 ----GAIDI---FGQSFP---QYDFVLIILGPVVLGLLWLLFHRTRW--GTLIRAATQDR 180

Query: 313 IACRSMGLNHVLVKLSAFTLGASTAGLAGVFFATYQGFVNPSSFTFFESALILAIVVLGG 372
               ++G+N   +  S FTLGA  AGL G      +   +         A +  IVV+GG
Sbjct: 181 EMVAALGVNQAWLFTSVFTLGAFLAGLGGAVQLPREAVNHVMDLQIITEAFV--IVVIGG 238

Query: 373 MGSTVGVVIAAFVLTVAPEL-LRSFSEYRVLLFGVLMVLMMIWRPRGLI 420
           +GS +G  +AA ++       +  F +  ++L  ++M ++++ RP GL+
Sbjct: 239 LGSVLGAFLAAVIIGELNAFGILIFPQLTLVLTFLVMAVILVVRPWGLL 287