Pairwise Alignments

Query, 291 a.a., High-affinity branched-chain amino acid transport ATP-binding protein BraF from Pseudomonas putida KT2440

Subject, 282 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

 Score =  197 bits (501), Expect = 2e-55
 Identities = 114/288 (39%), Positives = 169/288 (58%), Gaps = 35/288 (12%)

Query: 6   ILSVDNLMMQFGGIKALSDVSLKVRRNQIFALIGPNGAGKTTVFNCLTGFYKASGGRIEL 65
           +L V N+ ++FGG+KALSDVS  VR  ++F++IGPNGAGKT++ NC++G Y  S GR+  
Sbjct: 17  LLDVQNISLRFGGLKALSDVSFHVRPGELFSIIGPNGAGKTSMLNCISGRYTPSDGRVVF 76

Query: 66  NVRGSHTNVIQLLGERFQAADFVSPARFANRMYYKMFGGTHLVNRAGLARTFQNIRLFKE 125
           + R    +V +L            P R A                 G+ RTFQN+ LF  
Sbjct: 77  DGR----DVTKL-----------KPNRRAE---------------IGIGRTFQNLALFSH 106

Query: 126 MSVVENLLVAQHMWVNRNLLAGVLNTKAYRKAESDALDHAFYWLEVVDLVDCAN---RLA 182
           MSV++N++V +H  +  N   G L       A+ + L+H     EV+D +D  +     A
Sbjct: 107 MSVLDNIMVGRHHLLKNNFFTGALYWIG--GAQKEELEHRRKVEEVIDFLDIQHVRKATA 164

Query: 183 GELSYGQQRRLEIARAMCTRPKIICLDEPAAGLNPQETEALSRMIRVLRDEHDITVVLIE 242
           G LSYG ++R+E+ARA+   PK+I LDEP AG+N +E E ++R I  L +E  +T+++IE
Sbjct: 165 GTLSYGLRKRVELARAVALEPKLILLDEPMAGMNLEEKEDMARYIVDLNEEWGMTIIMIE 224

Query: 243 HDMGMVMSISDHIVVLDHGNVIAEGAPQDIRHNPTVIAAYLGADEEEL 290
           HDMG+VM IS  ++VLD G  + EG P  +  +P V  AYLG ++ E+
Sbjct: 225 HDMGVVMDISHRVMVLDFGRKLVEGEPAAVLADPHVRKAYLGEEDLEI 272