Pairwise Alignments

Query, 291 a.a., High-affinity branched-chain amino acid transport ATP-binding protein BraF from Pseudomonas putida KT2440

Subject, 274 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

 Score =  190 bits (482), Expect = 3e-53
 Identities = 115/293 (39%), Positives = 169/293 (57%), Gaps = 35/293 (11%)

Query: 2   SDDIILSVDNLMMQFGGIKALSDVSLKVRRNQIFALIGPNGAGKTTVFNCLTGFYKASGG 61
           S   IL+V+++ M+FGG+ A++D+   V   +I +LIGPNGAGKTT FN +TGF K + G
Sbjct: 5   SSSAILNVEHVGMKFGGLTAIADLHFDVHEGEILSLIGPNGAGKTTAFNIMTGFLKPTQG 64

Query: 62  RIELNVRGSHTNVIQLLGERFQAADFVSPARFANRMYYKMFGGTHLVNRAGLARTFQNIR 121
           R+                  F+  D +S  R             + + R GLARTFQ   
Sbjct: 65  RV-----------------LFRGRD-LSQTR------------PNEIARLGLARTFQRTS 94

Query: 122 LFKEMSVVENLLVAQHMWVNRNLLAGVLN----TKAYRKAESDALDHAFYWLEVVDLVDC 177
           +F + SV +N+L+  H + +      +L+    T A R+AE+   + A   +++V L   
Sbjct: 95  VFADDSVRDNVLIGLHRFGDDTRATALLDRLFPTPAARRAENAVRERAEAIIDMVGLSAR 154

Query: 178 ANRLAGELSYGQQRRLEIARAMCTRPKIICLDEPAAGLNPQETEALSRMIRVLRDEHDIT 237
           A   AG LSYG+QR +  A A+   PK++ LDEP +G+N  ET+   R+IR +RDE  +T
Sbjct: 155 AGDKAGSLSYGEQRLVGFALALAVEPKMLLLDEPVSGMNASETQGFVRLIRKVRDE-GVT 213

Query: 238 VVLIEHDMGMVMSISDHIVVLDHGNVIAEGAPQDIRHNPTVIAAYLGADEEEL 290
           ++L+EHDM MVM +SD IV L++G +IAEG P+ IR +P VI AYLG    +L
Sbjct: 214 ILLVEHDMPMVMEVSDRIVCLNYGRLIAEGPPEAIRTDPKVIEAYLGKSAAKL 266