Pairwise Alignments

Query, 291 a.a., High-affinity branched-chain amino acid transport ATP-binding protein BraF from Pseudomonas putida KT2440

Subject, 284 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

 Score =  211 bits (537), Expect = 2e-59
 Identities = 123/291 (42%), Positives = 177/291 (60%), Gaps = 40/291 (13%)

Query: 7   LSVDNLMMQFGGIKALSDVSLKVRRNQIFALIGPNGAGKTTVFNCLTGFYKASGGRIELN 66
           L+VD L + FGG+KAL+DVS +V+   I ALIGPNGAGKT++FNC++GFY+   G I L+
Sbjct: 18  LAVDGLGLWFGGLKALTDVSFEVKPGTITALIGPNGAGKTSLFNCISGFYRPRAGSIRLD 77

Query: 67  VRGSHTNVIQLLGERFQAADFVSPARFANRMYYKMFGGTHLVNRA--GLARTFQNIRLFK 124
                             AD                  TH   RA  GLARTFQNI LFK
Sbjct: 78  -----------------GADITR---------------THPPERAKAGLARTFQNIALFK 105

Query: 125 EMSVVENLLVAQHMWVNRNLLAGVLNTKAYRKAESDALDHAFYWLEVVDLVDC---ANRL 181
            M+V++N+ + +H  +  NLL  +    A R  E +    A    +++D ++     N+ 
Sbjct: 106 GMTVLDNIKLGRHAHMKTNLLQALTYWGAARAEEMEL--RAEVERQIIDFLEIDHIRNKP 163

Query: 182 AGELSYGQQRRLEIARAMCTRPKIICLDEPAAGLNPQETEALSRMIRVLRDEHDITVVLI 241
              LSYG Q+R+E+ARA+  RP+++ LDEP AG+N +ETE ++R I  +++E  I+++++
Sbjct: 164 VASLSYGLQKRVELARALAMRPRLLMLDEPVAGMNREETEDMARFILDVKEEWGISILMV 223

Query: 242 EHDMGMVMSISDHIVVLDHGNVIAEGAPQDIRHNPTVIAAYLGA-DEEELV 291
           EHDM MVM ISDH+VVL+ G VIA+G P +++ NP V AAYLG+ D  EL+
Sbjct: 224 EHDMAMVMDISDHVVVLNFGKVIAQGLPAEVQGNPEVAAAYLGSGDPAELM 274