Pairwise Alignments

Query, 291 a.a., High-affinity branched-chain amino acid transport ATP-binding protein BraF from Pseudomonas putida KT2440

Subject, 266 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

 Score =  190 bits (482), Expect = 3e-53
 Identities = 115/279 (41%), Positives = 158/279 (56%), Gaps = 31/279 (11%)

Query: 6   ILSVDNLMMQFGGIKALSDVSLKVRRNQIFALIGPNGAGKTTVFNCLTGFYKASGGRIEL 65
           +L V  + + FGG+KA+  VS KV   ++F++IGPNGAGKTT+FN +TG Y+ S G + L
Sbjct: 7   LLDVSGIGISFGGLKAVDAVSFKVGAGEVFSIIGPNGAGKTTLFNLVTGIYRPSRGSVRL 66

Query: 66  NVRGSHTNVIQLLGERFQAADFVSPARFANRMYYKMFGGTHLVNRAGLARTFQNIRLFKE 125
           +     T               V P R  +R               G+ARTFQN+++F  
Sbjct: 67  DGADITT---------------VPPHRRVSR---------------GMARTFQNLQIFFR 96

Query: 126 MSVVENLLVAQHMWVNRNLLAGVLNTKAYRKAESDALDHAFYWLEVVDLVDCANRLAGEL 185
           M+ VEN++V   +    + LA +L   +  +      + A   L+ V L   A+  AG L
Sbjct: 97  MTAVENVMVGCALSERTSFLADMLGLPSVFRQNRVTREKALALLDRVGLAALADAPAGAL 156

Query: 186 SYGQQRRLEIARAMCTRPKIICLDEPAAGLNPQETEALSRMIRVLRDEHDITVVLIEHDM 245
            YG  +RLEIARA+   PKI+ LDEPAAG N  ETEA+  +I  +  +  I VVLIEHDM
Sbjct: 157 PYGALKRLEIARALAADPKILLLDEPAAGCNAVETEAIDHLIAEIA-KGGIAVVLIEHDM 215

Query: 246 GMVMSISDHIVVLDHGNVIAEGAPQDIRHNPTVIAAYLG 284
            +VM ISD ++VL  G  +AEG P+ +R NP VIAAYLG
Sbjct: 216 KLVMKISDRVLVLAQGRPLAEGPPRAVRENPEVIAAYLG 254