Pairwise Alignments

Query, 291 a.a., High-affinity branched-chain amino acid transport ATP-binding protein BraF from Pseudomonas putida KT2440

Subject, 648 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) / ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  186 bits (472), Expect = 1e-51
 Identities = 113/286 (39%), Positives = 155/286 (54%), Gaps = 45/286 (15%)

Query: 6   ILSVDNLMMQFGGIKALSDVSLKVRRNQIFALIGPNGAGKTTVFNCLTGFYKASGGRIEL 65
           +L    ++MQFGG+KAL++V L+++R  I  LIGPNG+GK+T+ N LTG Y  + G I  
Sbjct: 398 VLEASGVLMQFGGLKALNNVDLRIKRGTIHGLIGPNGSGKSTMMNVLTGIYVPTAGAIS- 456

Query: 66  NVRGSHTNVIQLLGERFQAADFVSPARFANRMYYKMFGGTHLVNR-------AGLARTFQ 118
                                               FGG  LV R       +G+ARTFQ
Sbjct: 457 ------------------------------------FGGRSLVGRTSADIALSGIARTFQ 480

Query: 119 NIRLFKEMSVVENLLVAQHMWVNRNLLAGVLNTKAYRKAESDALDHAFYWLEVVDLVDCA 178
           N++LF EM+ ++N+ V  H     NLL     T  YR+  + A+      L+ V L   A
Sbjct: 481 NVQLFGEMTALQNVQVGLHHSFASNLLDVAAGTPRYRRESAAAVQRGLGLLKFVGLESFA 540

Query: 179 NRLAGELSYGQQRRLEIARAMCTRPKIICLDEPAAGLNPQETEALSRMIRVLRDEHDITV 238
              A  L YG+QR LEIARA+   P+++ LDEPAAGL   + + L  +IR +R EH +TV
Sbjct: 541 TEEARNLPYGKQRLLEIARALALDPQLLLLDEPAAGLTAPDIKELLGIIRKIR-EHGVTV 599

Query: 239 VLIEHDMGMVMSISDHIVVLDHGNVIAEGAPQDIRHNPTVIAAYLG 284
           +LIEH M +VMS+ D + VLD G  IAEG P  ++ +  VI AYLG
Sbjct: 600 ILIEHHMDVVMSMCDTVSVLDFGQKIAEGEPARVQADEKVIEAYLG 645