Pairwise Alignments

Query, 291 a.a., High-affinity branched-chain amino acid transport ATP-binding protein BraF from Pseudomonas putida KT2440

Subject, 254 a.a., Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) from Variovorax sp. SCN45

 Score =  189 bits (481), Expect = 4e-53
 Identities = 115/284 (40%), Positives = 162/284 (57%), Gaps = 36/284 (12%)

Query: 1   MSDDIILSVDNLMMQFGGIKALSDVSLKVRRNQIFALIGPNGAGKTTVFNCLTGFYKASG 60
           MS    L V ++ + FGG+KA++ +S +V + +I ALIGPNGAGK+T FNC++ FY  S 
Sbjct: 1   MSATAFLDVRDISVVFGGLKAVNGLSFEVEQGRIHALIGPNGAGKSTTFNCISRFYTPSS 60

Query: 61  GRIELNVRGSHTNVIQLLGERFQAADFVSPARFANRMYYKMFGGTHLVNRAGLARTFQNI 120
           G +    R   +               VSP R A+                G+ARTFQN+
Sbjct: 61  GSVTFEGRELTS---------------VSPHRMAS---------------LGIARTFQNL 90

Query: 121 RLFKEMSVVENLLVAQHMWVNRNLLAGVLNTKAYRKAESDALDHAFYWLEVVDLVDCANR 180
            LF E+SV+EN+L+  H      L       +  R+ + +  D A + LE V L D  ++
Sbjct: 91  ELFAELSVLENVLLGTHSRGAATL------GRLLRRPDRETEDFAMHLLERVGLADERHQ 144

Query: 181 LAGELSYGQQRRLEIARAMCTRPKIICLDEPAAGLNPQETEALSRMIRVLRDEHDITVVL 240
            A +L +G+Q+ LE+ARA+  RPK++ LDEPAAGL  +E E+L R+++ L     ITV+L
Sbjct: 145 PARDLDFGRQKLLELARALAIRPKLLLLDEPAAGLRNREIESLDRLLKELVARDGITVLL 204

Query: 241 IEHDMGMVMSISDHIVVLDHGNVIAEGAPQDIRHNPTVIAAYLG 284
           +EH M +VMSISD I V+  G  IAEG P +I  N  VI AYLG
Sbjct: 205 VEHVMQLVMSISDRITVMAFGEKIAEGTPSEIGSNARVIEAYLG 248