Pairwise Alignments

Query, 291 a.a., High-affinity branched-chain amino acid transport ATP-binding protein BraF from Pseudomonas putida KT2440

Subject, 274 a.a., ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  199 bits (507), Expect = 4e-56
 Identities = 121/295 (41%), Positives = 172/295 (58%), Gaps = 41/295 (13%)

Query: 2   SDDIILSVDNLMMQFGGIKALSDVSLKVRRNQIFALIGPNGAGKTTVFNCLTGFYKASGG 61
           S  + LSV+ + ++FGGI AL  VS      Q+ A+IGPNGAGKT+VFN ++GFY+ + G
Sbjct: 14  SGGLALSVEGVDLRFGGIHALRGVSFAAAPGQVTAVIGPNGAGKTSVFNTISGFYRPAAG 73

Query: 62  RIELNVRG-SHTNVIQLLGERFQAADFVSPARFANRMYYKMFGGTHLVNRAGLARTFQNI 120
           RI L     +HT V    G                                GLARTFQNI
Sbjct: 74  RILLGDEDITHTPVHARAGR-------------------------------GLARTFQNI 102

Query: 121 RLFKEMSVVENLLVAQHMWVNRNLLAGVLNTKAYRKA--ESDALDHAFYWLEVVDL--VD 176
            LF+ ++V+EN+ +  H      + AGV +   Y +A  E +    A    +V+D   +D
Sbjct: 103 ALFRGLTVLENVKLGGH----HTMQAGVFSALVYGRAAREEELRLRAEVERKVIDFLEID 158

Query: 177 CANRLAGE-LSYGQQRRLEIARAMCTRPKIICLDEPAAGLNPQETEALSRMIRVLRDEHD 235
               L+ + L YG Q+R+E+ARA+  RP+++ LDEP AG+N +ETE ++R I  +++E  
Sbjct: 159 HVRHLSVDVLPYGLQKRVELARALAMRPRVLLLDEPVAGMNREETEDMARFILDVQEEWG 218

Query: 236 ITVVLIEHDMGMVMSISDHIVVLDHGNVIAEGAPQDIRHNPTVIAAYLGADEEEL 290
           +TV+L+EHDMGMVM IS H+VVL+ G VIA G P ++R +P VI AYLGA+ E L
Sbjct: 219 VTVLLVEHDMGMVMDISSHVVVLNFGQVIASGTPAEVRRHPQVIEAYLGAESEAL 273