Pairwise Alignments

Query, 291 a.a., High-affinity branched-chain amino acid transport ATP-binding protein BraF from Pseudomonas putida KT2440

Subject, 273 a.a., ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  192 bits (487), Expect = 9e-54
 Identities = 103/287 (35%), Positives = 167/287 (58%), Gaps = 25/287 (8%)

Query: 2   SDDIILSVDNLMMQFGGIKALSDVSLKVRRNQIFALIGPNGAGKTTVFNCLTGFYKASGG 61
           S DI+LS   L ++FGG+ A++ VS  VRR ++F LIGPNGAGKTTVFN ++  Y  + G
Sbjct: 3   SGDILLSAKELSVRFGGVLAVNKVSFDVRRGEVFTLIGPNGAGKTTVFNLISRIYTPTTG 62

Query: 62  RIELNVRGSHTNVIQLLGERFQAADFVSPARFANRMYYKMFGGTHLVNRAGLARTFQNIR 121
             E+   G     + L  +                         H +   G+ARTFQNI 
Sbjct: 63  --EITWHGEEGGPLALTQQ-----------------------APHAIAALGIARTFQNIE 97

Query: 122 LFKEMSVVENLLVAQHMWVNRNLLAGVLNTKAYRKAESDALDHAFYWLEVVDLVDCANRL 181
           LF+  +V+ NLL+ +H        + V  T A R+AE  A + A   +E++DL    + +
Sbjct: 98  LFEHATVLHNLLIGRHTHRQTGFWSEVFFTPATRRAEIAAREKAEQVIELLDLQHHRDSM 157

Query: 182 AGELSYGQQRRLEIARAMCTRPKIICLDEPAAGLNPQETEALSRMIRVLRDEHDITVVLI 241
              L YG ++ +E+ARA+CT PK++ LDEP++GLN +ET  ++  I+ ++ E  ++V+++
Sbjct: 158 VAGLPYGVRKVVELARALCTEPKLLLLDEPSSGLNVEETADMAFWIQDIQHELGVSVLMV 217

Query: 242 EHDMGMVMSISDHIVVLDHGNVIAEGAPQDIRHNPTVIAAYLGADEE 288
           EHDM +V  +SD ++ ++ G V+A G+P +++ +P V+ AYLG  ++
Sbjct: 218 EHDMSLVSKVSDRVLAMNQGEVLATGSPGEVQADPRVVEAYLGTVDD 264