Pairwise Alignments

Query, 291 a.a., High-affinity branched-chain amino acid transport ATP-binding protein BraF from Pseudomonas putida KT2440

Subject, 277 a.a., ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  198 bits (503), Expect = 1e-55
 Identities = 108/286 (37%), Positives = 167/286 (58%), Gaps = 36/286 (12%)

Query: 4   DIILSVDNLMMQFGGIKALSDVSLKVRRNQIFALIGPNGAGKTTVFNCLTGFYKASGGRI 63
           ++IL V N+ + FGG+KAL+D+S  VR +++ A+IGPNGAGK+++ NC+ G Y+   G I
Sbjct: 24  EVILDVQNISLSFGGVKALTDISFNVREHEVRAIIGPNGAGKSSMLNCINGVYQPQQGSI 83

Query: 64  ELNVRGSHTNVIQLLGERFQAADFVSPARFANRMYYKMFGGTHLVNRAGLARTFQNIRLF 123
                          G+ F+  +                  +  V   G+ARTFQN+ LF
Sbjct: 84  TFR------------GQTFRHMN------------------SRQVAEMGVARTFQNLALF 113

Query: 124 KEMSVVENLLVAQHMWVNRNLLAGVLNTKAYRKAESDALDHAFYWLEVVDLVDC-ANRL- 181
           K MSV++N++  +++ +   LLA       +  AE + L H  +   ++D ++  A+R  
Sbjct: 114 KGMSVLDNIMTGRNLKMKSGLLAQAFR---WGPAEREELQHREFVEHIIDFLEIQAHRKT 170

Query: 182 -AGELSYGQQRRLEIARAMCTRPKIICLDEPAAGLNPQETEALSRMIRVLRDEHDITVVL 240
             G L YG Q+R+++ RA+   P+++ LDEP AG+N +E + +SR I  + DE   T+VL
Sbjct: 171 PVGRLPYGLQKRVDLGRALAMEPQVLLLDEPMAGMNVEEKQDMSRFILDVNDEFGATIVL 230

Query: 241 IEHDMGMVMSISDHIVVLDHGNVIAEGAPQDIRHNPTVIAAYLGAD 286
           IEHDMG+VM ISD +VVLD+G  I +G P ++R N  VI AYLG +
Sbjct: 231 IEHDMGVVMDISDRVVVLDYGKKIGDGTPDEVRSNEDVIRAYLGVE 276