Pairwise Alignments

Query, 238 a.a., high-affinity branched-chain amino acid transporter, ATP-binding from Pseudomonas putida KT2440

Subject, 257 a.a., ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  200 bits (508), Expect = 3e-56
 Identities = 107/238 (44%), Positives = 157/238 (65%), Gaps = 2/238 (0%)

Query: 1   MSAPILELKDLDVFYGPIQALKKVSMHINEGETVSLIGANGAGKSTLLMSIFGQPRAASG 60
           MS  +L+L +++  YGPI+A++ VS+ + +GE  +++G+NGAGK+T+L +I G      G
Sbjct: 1   MSDIVLQLLNVESAYGPIKAIRGVSLKVRQGEIATVLGSNGAGKTTILKTISGIIDPRKG 60

Query: 61  HIVYRGTDITRKSSHYIASNGIAQSPEGRRVFPDMTVEENLMMGTIPIGDKH-ADEDMQR 119
            I ++  DIT K   YI   G++  PEGR VFP ++V++NL+MG     D+     DM+ 
Sbjct: 61  SIEFQSKDITAKDPAYIVQQGLSHVPEGREVFPLLSVKDNLLMGAYTRKDRDGVARDMET 120

Query: 120 MYELFPRLKERRNQRAMTMSGGEQQMLAIARALMSRPKLLLLDEPSLGLAPIVVKQIFS- 178
           +Y  FP L+ER  Q A  +SGG+QQMLAI+RA+M+ P L+LLDEPSLGL+P + K+IF  
Sbjct: 121 VYAYFPILRERATQDAGLLSGGQQQMLAISRAIMAAPHLILLDEPSLGLSPKLTKEIFEI 180

Query: 179 TLRELAKTGMTIFLVEQNANHALKLSDRAYVMVNGQIRMTGTGQELLVNEEVRNAYLG 236
            +R   + G TI LVEQNAN AL  +D  YV+ NG+I M  + + L   E+++  YLG
Sbjct: 181 VVRINRERGTTILLVEQNANMALNAADHGYVLENGRIVMEDSCERLREKEDIKEFYLG 238