Pairwise Alignments

Query, 238 a.a., high-affinity branched-chain amino acid transporter, ATP-binding from Pseudomonas putida KT2440

Subject, 244 a.a., ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  197 bits (500), Expect = 2e-55
 Identities = 108/239 (45%), Positives = 155/239 (64%), Gaps = 4/239 (1%)

Query: 1   MSAPILELKDLDVFYGPIQALKKVSMHINEGETVSLIGANGAGKSTLLMSIFGQPRAASG 60
           M+ P+L ++DL   YG  + L  + +  ++G  V++IG NGAGKSTLL ++ G    + G
Sbjct: 1   MTTPLLRIRDLHAGYGRAEVLHGIDLQADQGRVVTVIGPNGAGKSTLLNALMGV-LPSKG 59

Query: 61  HIVYRGTDITRKSSHYIASNGIAQSPEGRRVFPDMTVEENLMMGT---IPIGDKHADEDM 117
            I ++G  I+  +       GIA  PE R +F  M VE+NL++G    + + ++   + +
Sbjct: 60  GIEFKGQPISAMTLEERVMLGIALVPEKRELFGTMPVEDNLVLGAFRQVRLRNRQWRDRI 119

Query: 118 QRMYELFPRLKERRNQRAMTMSGGEQQMLAIARALMSRPKLLLLDEPSLGLAPIVVKQIF 177
             +Y LFPRLKERR Q A T+SGGE+QMLA+ RALMSRP LL+LDEPSLGLAP+VV++IF
Sbjct: 120 DEVYTLFPRLKERRAQLAGTLSGGERQMLAVGRALMSRPTLLMLDEPSLGLAPLVVQEIF 179

Query: 178 STLRELAKTGMTIFLVEQNANHALKLSDRAYVMVNGQIRMTGTGQELLVNEEVRNAYLG 236
            T+  L  TG+TI LVEQNA  AL+++D  YV+  G + + G   +L V+  V + YLG
Sbjct: 180 RTVDALRATGVTILLVEQNARAALEVADHGYVLEMGSVSLEGEAGKLAVDPRVIDTYLG 238