Pairwise Alignments

Query, 211 a.a., Transcriptional regulator, TetR family from Pseudomonas putida KT2440

Subject, 198 a.a., HTH-type transcriptional repressor FabR from Alteromonas macleodii MIT1002

 Score =  124 bits (311), Expect = 1e-33
 Identities = 78/199 (39%), Positives = 108/199 (54%), Gaps = 6/199 (3%)

Query: 2   LPRAEQKLQTRQALLDAACLLMESGRGFGSISLREVAKTAGIVPTGFYRHFSDMDALGLA 61
           + R EQKL+TRQ ++ AA  L++  R   +ISLREVA+ AGI PT FYRHF DMD LGL 
Sbjct: 1   MSRQEQKLKTRQNIIHAAFSLLDENRSLSAISLREVAREAGIAPTSFYRHFKDMDELGLT 60

Query: 62  LVAEIDTTFRQTIRLVRQNEFELGGITDASVRIFLDVVAAHRAQFLFLAREQYGGAQAVR 121
           LV E     RQ +R  R+     GG+   SV  F++ +AA+   F  L RE  G + A R
Sbjct: 61  LVDEAGLALRQLMRQARRRIASGGGVIHTSVETFMEFIAANTNVFRLLLREHTGTSSAYR 120

Query: 122 QAIARLRQDISDDLATDLARMKRWQHLDSAALAVMADLVVKTVFATLPELIDNPEAGYPQ 181
            A+ R  Q   D+L   +      Q ++ A   + AD +V+ VF+   E +   EA    
Sbjct: 121 LAVFREIQHFIDELTDYIIEQ---QGVEYACAQLQADAMVRLVFSAGAEAL---EADDKL 174

Query: 182 ALTPQEKITQQLRFIFVGA 200
                E++  QLRF+ +GA
Sbjct: 175 RREIGERVKAQLRFVQLGA 193