Pairwise Alignments

Query, 293 a.a., putative permease of the drug/metabolite transporter (DMT) superfamily from Pseudomonas putida KT2440

Subject, 303 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score = 54.3 bits (129), Expect = 3e-12
 Identities = 61/285 (21%), Positives = 125/285 (43%), Gaps = 32/285 (11%)

Query: 11  LIWAGNTVVTKMSAGAIHPAEIGFYRWLLAALLFTPFL------LP---AVWRNRAAIRP 61
           L+W G+     ++   + P  I   R  LAA+            LP   AVWR       
Sbjct: 14  LLWGGSFFFIGVAVKELPPVTIVTLRVSLAAVALLVVCRIMGLRLPREWAVWR------- 66

Query: 62  HLAKVFVLGVLGMAMYQSLAYFAAGITSATNMGIILSLMPLMSLALS-IAWLGQRLSYGA 120
                F +G+L   +   L  +     ++    I+ +  PL ++ ++      ++++   
Sbjct: 67  ---AFFGMGLLNNIIPFCLIVWGQTQIASGLASILNATTPLFTVIVAHFLTADEKMTGNK 123

Query: 121 LLGAVVSFFGVLEVVSAGHPASLLQQGLNSGDLLMLVATLAYALYSFLLKKWQ-LRLPPM 179
           L G ++ F GV  ++    PA+        G + +L A ++Y+      ++++ + +PP+
Sbjct: 124 LAGVLIGFVGVATMIG---PAAFGGSSGLWGQIAILGAAISYSFAGIFGRRFKAMGVPPL 180

Query: 180 QLLYLQVLVAIVVLLPLFLLSDKT------GLNSHNIGLVLYACVLASMIAPLVWMQAVH 233
                Q+  + ++L+P  LL DK       GL +   G ++   +L++ +A L++ + + 
Sbjct: 181 MTATGQISSSTLMLIPAALLIDKPWTLAMPGLGTW--GALIGIALLSTALAYLIFFRILA 238

Query: 234 RLGPSRTTLFFNLLPLVTALIAAVVLDEQLASYHLVGGLLTLAGV 278
             G +   L   L+P+   L+ +++L EQL   H  G  +  AG+
Sbjct: 239 SAGATNLALVTFLIPVSAILLGSLILGEQLEIKHFAGMAMIAAGL 283



 Score = 25.0 bits (53), Expect = 0.002
 Identities = 13/66 (19%), Positives = 30/66 (45%)

Query: 69  LGVLGMAMYQSLAYFAAGITSATNMGIILSLMPLMSLALSIAWLGQRLSYGALLGAVVSF 128
           + +L  A+   + +       ATN+ ++  L+P+ ++ L    LG++L      G  +  
Sbjct: 221 IALLSTALAYLIFFRILASAGATNLALVTFLIPVSAILLGSLILGEQLEIKHFAGMAMIA 280

Query: 129 FGVLEV 134
            G+  +
Sbjct: 281 AGLAAI 286