Pairwise Alignments

Query, 262 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 288 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  148 bits (373), Expect = 1e-40
 Identities = 77/223 (34%), Positives = 114/223 (51%)

Query: 32  AVHQHAWGQLNYTAHGVMQLDVAGQRFLSPPHYAVWVPPDTEHGCYNPQAIVYRSIYLDR 91
           A H H  GQL YT  GV+   +    ++ PP  A+W+P    H            + +D 
Sbjct: 39  APHSHRKGQLMYTLRGVIHCQIEAGIWIVPPQCALWIPGGLPHAARGSGEAEVYCLLIDP 98

Query: 92  SLCAALPPHPCSLMISDILKAILGDFARRNLKVAEDERDQRLVQVLLDQLLLAPTLACYL 151
               ALP   C+L +S +L  ++           ED    RL++ LLD+L  AP    +L
Sbjct: 99  DAAGALPAQCCTLSVSGLLHELISKAVSFPQLYDEDGAQGRLIRTLLDELAQAPIEDLHL 158

Query: 152 PFAHSDGLRQVLDALSAEPGDNRPLADWAARVHVSERTLARQFLRELGISFGEWRLRLRF 211
           P      LR++ D+L A+PGD   L  WA R+ +SER++ R  L E G+SFG WR +L  
Sbjct: 159 PMPRDPRLRRLADSLLADPGDKATLGQWAMRIGMSERSMTRLLLEEFGLSFGRWRRQLHV 218

Query: 212 LRAIEALEAGLPIQAIAFDLGYSSASAFIAMFQRQARCTPEQY 254
           + +++ L  G  +Q +A DLGY +AS FI MF++     P +Y
Sbjct: 219 ILSLQRLARGDSVQRVALDLGYENASGFITMFRKAVGQPPARY 261