Pairwise Alignments

Query, 262 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 254 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 95.9 bits (237), Expect = 7e-25
 Identities = 66/222 (29%), Positives = 95/222 (42%), Gaps = 2/222 (0%)

Query: 34  HQHAWGQLNYTAHGVMQLDVAGQRFLSPPHYAVWVPPDTEHGCYNPQAIVYRSIYLDRSL 93
           H H WGQL Y   GVM ++   +  + PP  AVW+PP   HG      +  R+IYL  +L
Sbjct: 32  HSHDWGQLLYAMSGVMWVETPREALVVPPQRAVWLPPGVAHGIRVVSDLQMRNIYLRPAL 91

Query: 94  CAALPPHPCSLMISDILKAILGDFARRNLKVAEDERDQRLVQVLLD-QLLLAPTLACYLP 152
            A L      + +  +L+ ++               D  +   LL+ Q      +   +P
Sbjct: 92  AATLDSQVQVIEVGGLLRELIVTLVEEGDSGEAAYYDAVVSLALLELQRARRSQIRIAMP 151

Query: 153 FAHSDGLRQVLDALSAEPGDNRPLADWAARVHVSERTLARQFLRELGISFGEWRLRLRFL 212
                 L     A+ A P         A     S RTL+R F   LG+ F EWR +++  
Sbjct: 152 VGVDRRLITACQAIMAAPSLEVAFEHHAETAGASVRTLSRLFQNNLGMGFAEWRRQVQLA 211

Query: 213 RAIEALEAGLPIQAIAFDLGYSSASAFIAMFQRQARCTPEQY 254
            A+  L  G  + AIA  LGY S S+F  MF+R+    P  Y
Sbjct: 212 TAVAELIQGQSVSAIARSLGY-SPSSFSDMFRRELGVAPSHY 252