Pairwise Alignments

Query, 262 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 262 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  123 bits (308), Expect = 4e-33
 Identities = 71/221 (32%), Positives = 111/221 (50%)

Query: 34  HQHAWGQLNYTAHGVMQLDVAGQRFLSPPHYAVWVPPDTEHGCYNPQAIVYRSIYLDRSL 93
           H H  GQL +   GVM +      ++ P    VWVP   EH       +  R+++++   
Sbjct: 35  HTHRRGQLIHAISGVMLVSAVAGSWVVPTGRGVWVPAGMEHQIRMAGEVKMRTVFVEPGT 94

Query: 94  CAALPPHPCSLMISDILKAILGDFARRNLKVAEDERDQRLVQVLLDQLLLAPTLACYLPF 153
            A L      + +  +L+ ++       L  A   RD+R+++++LD++  AP L+ ++P 
Sbjct: 95  RADLGAECRVIHVGALLRELIVTAVALPLDYAPGGRDERVMELILDEIQAAPVLSLHVPM 154

Query: 154 AHSDGLRQVLDALSAEPGDNRPLADWAARVHVSERTLARQFLRELGISFGEWRLRLRFLR 213
                L  + + L  +P     L DWA R+H++ RTLAR F RE G++FG W  + R L 
Sbjct: 155 PRHARLAVLCEELVRDPSLPATLDDWALRLHMNTRTLARLFQRETGMNFGAWCRQARLLL 214

Query: 214 AIEALEAGLPIQAIAFDLGYSSASAFIAMFQRQARCTPEQY 254
           ++  L AG  I  +A   GY S SAF AMF+R     P QY
Sbjct: 215 SLPQLAAGASILEVALAHGYESPSAFTAMFRRTLGVPPSQY 255