Pairwise Alignments

Query, 262 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 241 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  122 bits (305), Expect = 9e-33
 Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 1/222 (0%)

Query: 34  HQHAWGQLNYTAHGVMQLDVAGQRFLSPPHYAVWVPPDTEHGCYNPQAIVYRSIYLDRSL 93
           H H  GQL     G+  ++    R++ PP +  W+ P   H   +       S+++D   
Sbjct: 17  HAHEDGQLFALREGLQVIETPSGRWVQPPGWIGWIAPRCAHAAQSFGPTAGWSLHIDSQA 76

Query: 94  CAALPPHPCSLMISDILKAILGDFARRNLKVAE-DERDQRLVQVLLDQLLLAPTLACYLP 152
            A LP  P    ++ ++  ++      +      D R  RLV VL+D+L  +  L+ +LP
Sbjct: 77  AAVLPDGPHVFAVTPLVLGLVDRLTSLDASAGSLDARRARLVGVLIDELAASERLSLHLP 136

Query: 153 FAHSDGLRQVLDALSAEPGDNRPLADWAARVHVSERTLARQFLRELGISFGEWRLRLRFL 212
                 L  +  AL+ +P     + DWA R+ V+ RTL R+F  E G+SF +WR + R L
Sbjct: 137 MPQDKRLAMMAAALANDPSLPDTIDDWADRIGVARRTLTRRFAAETGLSFAQWRQQARLL 196

Query: 213 RAIEALEAGLPIQAIAFDLGYSSASAFIAMFQRQARCTPEQY 254
           +A+E L    P+  +A  +GY+S SAFI  F++    TP ++
Sbjct: 197 KAVELLSLKEPVTVVALTVGYNSVSAFIEAFRKHFGRTPSRF 238