Pairwise Alignments

Query, 262 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 265 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  313 bits (801), Expect = 3e-90
 Identities = 155/254 (61%), Positives = 181/254 (71%)

Query: 4   KYLDIPQFTQLPAPVYFRHDEFVADTHSAVHQHAWGQLNYTAHGVMQLDVAGQRFLSPPH 63
           + L I     +  P YFR+D+  ADTH+A H H WG LNY AHG MQ+D  G RFLSPP 
Sbjct: 6   RLLAIQDVEGMEGPFYFRYDDIGADTHAASHSHTWGHLNYAAHGTMQMDTEGLRFLSPPQ 65

Query: 64  YAVWVPPDTEHGCYNPQAIVYRSIYLDRSLCAALPPHPCSLMISDILKAILGDFARRNLK 123
           YAVW+PP   H C    AIVYRSIY+   LC  LP  PC++ IS I+K++L DFA R+L 
Sbjct: 66  YAVWIPPKVVHSCTLRHAIVYRSIYIAPGLCGRLPAEPCTVRISPIIKSVLADFAARDLH 125

Query: 124 VAEDERDQRLVQVLLDQLLLAPTLACYLPFAHSDGLRQVLDALSAEPGDNRPLADWAARV 183
           V   E D RL  V++DQL LA    CYLP A S  L  VL+AL A PGD+RPLA WA  V
Sbjct: 126 VPRTEADLRLAHVVVDQLALAEVQRCYLPAAASPALVGVLEALQAAPGDHRPLAQWADSV 185

Query: 184 HVSERTLARQFLRELGISFGEWRLRLRFLRAIEALEAGLPIQAIAFDLGYSSASAFIAMF 243
           H++ERTLARQ  RELG+SFGEWR RLRFLRAI+ALEAG  +Q IAFDLGYS+ASAFIAMF
Sbjct: 186 HMTERTLARQCQRELGMSFGEWRQRLRFLRAIDALEAGRTVQEIAFDLGYSTASAFIAMF 245

Query: 244 QRQARCTPEQYRRQ 257
           QR+A  TPEQYRR+
Sbjct: 246 QREAGTTPEQYRRE 259