Pairwise Alignments

Query, 262 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 255 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score = 95.9 bits (237), Expect = 7e-25
 Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 2/222 (0%)

Query: 34  HQHAWGQLNYTAHGVMQLDVAGQRFLSPPHYAVWVPPDTEHGCYNPQAIVYRSIYLDRSL 93
           H H   Q  Y A GVM++      ++ PP   VW+P    H       +  RS+Y++   
Sbjct: 32  HSHRRAQFLYGATGVMEVGTDDGAWVVPPQRGVWIPAGKPHRV-RMLGVSTRSLYIEPRD 90

Query: 94  CAALPPHPCSLMISDILKAILGDFARRNLKVAEDERDQRLVQVLLDQLLLAPTLAC-YLP 152
                     L +S +L+ +L +      +     RD  L++++L ++  A  L   ++P
Sbjct: 91  VPRKGDQCEVLNVSPLLRQLLMEAIEAPAEYDRQGRDGVLMRLVLHEVARADALPLLHVP 150

Query: 153 FAHSDGLRQVLDALSAEPGDNRPLADWAARVHVSERTLARQFLRELGISFGEWRLRLRFL 212
                 L  +       P  +   + WA +++VSERT  R+F  E G++FG+WR R   L
Sbjct: 151 LPRDPALAGLCVEFLRRPDIHAAPSTWAGQLNVSERTFNRRFSLETGMAFGKWRQRACVL 210

Query: 213 RAIEALEAGLPIQAIAFDLGYSSASAFIAMFQRQARCTPEQY 254
            A+  L AG P+  +A D+GY S  AF  MF++     P  +
Sbjct: 211 VALSRLAAGEPVTVVALDMGYDSPGAFSTMFRKTLGRPPSHF 252