Pairwise Alignments

Query, 262 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 236 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  101 bits (252), Expect = 1e-26
 Identities = 67/224 (29%), Positives = 110/224 (49%), Gaps = 9/224 (4%)

Query: 32  AVHQHAWGQLNYTAHGVMQLDVAGQRFLSPPHYAVWVPPDTEHGCYNPQAIVYRSIYLDR 91
           A H HA  QL Y A GVM++   G  ++ P  +A+W+P    H       +  R++ LD 
Sbjct: 15  ASHCHAEDQLIYAASGVMRVSSEGGSWVIPGGHALWMPAGVSHAIRMKGVVCMRTLLLDA 74

Query: 92  SLCAALPPHPCSLMISDILKAILGDFARRNLKVAEDERDQRLVQVLLDQLLLAPTLACYL 151
            +        C +++   L   L   A R L + +    + L+   L +L  A  +  ++
Sbjct: 75  HI------ERCQVIVVSGLLRELILAASRVLNLRDGAHARALI---LYELAAARRIDAFV 125

Query: 152 PFAHSDGLRQVLDALSAEPGDNRPLADWAARVHVSERTLARQFLRELGISFGEWRLRLRF 211
           P      LR   +    +P  +  L    A++++S R++AR F RE+G+S+G+WR R R 
Sbjct: 126 PTPQHARLRAWCERFLQDPAQDLTLEQCGAQLNMSARSVARLFQREVGMSYGQWRARARV 185

Query: 212 LRAIEALEAGLPIQAIAFDLGYSSASAFIAMFQRQARCTPEQYR 255
           + + + L  G PI  +A + GY SASAF AMF+R     P  ++
Sbjct: 186 MLSQQCLADGKPILNVALEHGYQSASAFTAMFKRILGHAPSDWQ 229