Pairwise Alignments

Query, 319 a.a., Curved DNA-binding protein from Pseudomonas putida KT2440

Subject, 374 a.a., molecular chaperone DnaJ from Pseudomonas simiae WCS417

 Score =  182 bits (463), Expect = 8e-51
 Identities = 123/355 (34%), Positives = 176/355 (49%), Gaps = 73/355 (20%)

Query: 4   KDYYKILGVEPTADEKAIKAAYRKLARKYHPDVSKE-RDAEEKFKEANEAYEVLGDAQKR 62
           +DYY++LGVE  + E  +K AYR+LA K+HPD + + +++EE FKEANEAYE L D  KR
Sbjct: 4   RDYYEVLGVERGSSEADLKKAYRRLAMKHHPDRNPDNKESEEMFKEANEAYECLCDPNKR 63

Query: 63  AEFDEIRKYGGQHGRPFQAPPGWESRGGGGGFEGGDFSDFFSSIFGGRSAGGNPFGGARQ 122
           A +D+   YG     P          GGG GF G +FSD F  +F       + FGG R 
Sbjct: 64  AAYDQ---YGHAGVDPSMG-------GGGAGFGGQNFSDIFGDVF------SDFFGGGRG 107

Query: 123 QQRSAGRRGQDVELELAVFLEETLSKESKQI---------------------SFQVPQTN 161
            QR   +RG D+   L + LEE +   S  I                         P   
Sbjct: 108 GQRGGAQRGSDLRYTLELNLEEAVRGTSVNIRVPTLVNCKPCDGSGAKKGSSPITCPTCG 167

Query: 162 AMGQ---RTGFTT-------------------------------KTLNVRIPAGVTDGER 187
            +GQ   + GF +                               KTL V++PAGV  G+R
Sbjct: 168 GIGQVRMQQGFFSVQQTCPRCHGQGKIISDPCDSCHGEGRVEEYKTLAVKVPAGVDTGDR 227

Query: 188 IRLKGQGAPGSGGGANGDLFLTIRMAPHPLFDVEGHDLIITVPLAPWEAALGAKVAVPTL 247
           IRL G+G  G+ GG  GDL++ I +  H +F  +G  L   VP++  +AALG ++ +PTL
Sbjct: 228 IRLSGEGEAGTQGGPTGDLYVVINVREHSIFQRDGKHLFCEVPISFVDAALGGELEIPTL 287

Query: 248 DGKINLTIRPDSQSGQRLRVPGKGLAN-KQGERGNLYAQLKVVMPPASDESAREL 301
           DG++ L I   +Q+G++ R+ GKG+A  + G  G+L  ++ V  P   +   REL
Sbjct: 288 DGRVKLKIPEGTQTGKQFRIRGKGVAPVRGGGAGDLMCRVAVETPVNLNRRQREL 342