Pairwise Alignments

Query, 319 a.a., Curved DNA-binding protein from Pseudomonas putida KT2440

Subject, 379 a.a., Chaperone protein DnaJ from Variovorax sp. SCN45

 Score =  173 bits (438), Expect = 7e-48
 Identities = 124/368 (33%), Positives = 174/368 (47%), Gaps = 82/368 (22%)

Query: 4   KDYYKILGVEPTADEKAIKAAYRKLARKYHPDVSK---ERDAEEKFKEANEAYEVLGDAQ 60
           +DYY+ LGV   A E+ IK AYRKLA K+HPD +     +DAE KFKE  EAYE+L D Q
Sbjct: 5   RDYYETLGVPKNASEEEIKKAYRKLAMKHHPDRNHGDTAKDAEAKFKEVKEAYEMLSDGQ 64

Query: 61  KRAEFDEIRKYGGQHGRPFQAPPGWESRGGGGGFEGGDFSDFFSSIFGGRSAGGNPFGGA 120
           KRA +D+   YG     P         RGG G    G F++ F  IFG      + FGG 
Sbjct: 65  KRAAYDQ---YGHAGVDP-------NMRGGPGAEGFGGFAEAFGDIFG------DVFGGG 108

Query: 121 RQQQRSAGR---RGQDVELELAVFLEETLSKESKQISFQVPQ------------------ 159
            + + S+GR   RG D+   + + LEE  + E K    ++P                   
Sbjct: 109 GRGRTSSGRQVFRGSDLSYAMEITLEE--AAEGKTTEIRIPTWDECDTCHGSGAKPGTKP 166

Query: 160 --------TNAMGQRTGFTT-------------------------------KTLNVRIPA 180
                     A+  R GF +                               KTL V+I A
Sbjct: 167 ITCTTCHGAGAVQMRQGFFSVQQTCPTCHGSGKIIPEPCTACHGQGKIKRNKTLEVKIRA 226

Query: 181 GVTDGERIRLKGQGAPGSGGGANGDLFLTIRMAPHPLFDVEGHDLIITVPLAPWEAALGA 240
           G+ DG+R+R+ G G PG  GG  GDL++ IR+  H +F+ +G +L   VP++   AALG 
Sbjct: 227 GIDDGQRMRVTGSGEPGVNGGPPGDLYIEIRLKKHDIFERDGDNLHCVVPVSMTTAALGG 286

Query: 241 KVAVPTLDGKINLTIRPDSQSGQRLRVPGKGLAN-KQGERGNLYAQLKVVMPPASDESAR 299
           ++ VPTL G   + I   +QSG++ R+ GKG+        G+LY  ++V  P    E  R
Sbjct: 287 EINVPTLKGAAAIDIPEGTQSGKQFRLRGKGIKGVNSSYPGDLYCHVRVETPVKLTEFQR 346

Query: 300 ELWTKLSE 307
           +L   L +
Sbjct: 347 KLLKDLDD 354