Pairwise Alignments

Query, 319 a.a., Curved DNA-binding protein from Pseudomonas putida KT2440

Subject, 306 a.a., DnaJ-class molecular chaperone CbpA from Sphingobium sp. HT1-2

 Score =  179 bits (455), Expect = 6e-50
 Identities = 112/296 (37%), Positives = 159/296 (53%), Gaps = 26/296 (8%)

Query: 5   DYYKILGVEPTADEKAIKAAYRKLARKYHPDVSKERD-AEEKFKEANEAYEVLGDAQKRA 63
           D Y  LGV  +A E  IK+AYRKLA++YHPD +++   A EKF     AY++L D  KRA
Sbjct: 3   DPYSTLGVARSASEAEIKSAYRKLAKQYHPDKNQDNPKAAEKFSAVTNAYDLLSDKDKRA 62

Query: 64  EFDEIR-KYGGQHGRPFQAPPGWESRGGGGGFE----GGDFSDFFSSIFGG---RSAGGN 115
            FD       G    PF    G   RG  GGFE    G DF D F  +FGG   R+ GG 
Sbjct: 63  RFDRGEIDADGNPTAPFGFGGGGGGRGRPGGFEFNEGGADFGDIFEGLFGGAGRRAGGGG 122

Query: 116 PFGGARQQQRSAGRRGQDVELELAVFLEETLSKESKQISFQVPQTNAMGQRTGFTTKTLN 175
            FGG  +    A  +G +V   LAV   +  +   ++I+ Q               KT++
Sbjct: 123 GFGGFGRGAPPA--KGANVAYRLAVQFVDAATLAPQRITLQ-------------DGKTID 167

Query: 176 VRIPAGVTDGERIRLKGQGAPGSGGGANGDLFLTIRMAPHPLFDVEGHDLIITVPLAPWE 235
           +++PAGV  G ++RL G+G PG+GG   GD  +TI +  HP F  +G ++++ +P+   E
Sbjct: 168 LKLPAGVETGTQMRLTGKGQPGAGGA--GDAIVTIEVKSHPFFKRDGDNVLLDLPITINE 225

Query: 236 AALGAKVAVPTLDGKINLTIRPDSQSGQRLRVPGKGLANKQGERGNLYAQLKVVMP 291
           A  G KV VPT+DG + L +   + SG+ LR+ GKG   K G+RG+    L + +P
Sbjct: 226 AVKGGKVKVPTVDGPVMLGVPAGTTSGKTLRLRGKGFTGKDGQRGDQLVTLLIDVP 281