Pairwise Alignments

Query, 319 a.a., Curved DNA-binding protein from Pseudomonas putida KT2440

Subject, 224 a.a., DnaJ-class molecular chaperone CbpA from Sphingobium sp. HT1-2

 Score =  117 bits (293), Expect = 3e-31
 Identities = 81/233 (34%), Positives = 122/233 (52%), Gaps = 31/233 (13%)

Query: 7   YKILGVEPTADEKAIKAAYRKLARKYHPDVSK-ERDAEEKFKEANEAYEVLGDAQKRAEF 65
           Y+ LGV P+A  + I+ AYRKLA+K HPD++  ++ AE+KFK+   AY++L DA KR  +
Sbjct: 5   YEKLGVAPSASAEEIQKAYRKLAKKLHPDLNPGDKAAEDKFKDVAGAYDLLSDADKRRRY 64

Query: 66  D--EIRKYGGQHGRPFQAPPGWESRGGGGGFEGGDFSDFFSSIFGGRSAGGNPFGGA--- 120
           D  EI + G +       PP    R     + G DF  + S   G    GGN    A   
Sbjct: 65  DAGEIDETGAER------PPQQFYRD----YAGSDFGRYASDA-GYADFGGNDDVFADLF 113

Query: 121 -RQQQRSAGRRGQDVELELAVFLEETLSKESKQISFQVPQTNAMGQRTGFTTKTLNVRIP 179
            R  +  A RRGQD+   LA+   ++++  S++++                  TL+V IP
Sbjct: 114 RRNAEARANRRGQDLLYRLAISFADSVTGVSQRLTLP-------------GGGTLDVTIP 160

Query: 180 AGVTDGERIRLKGQGAPGSGGGANGDLFLTIRMAPHPLFDVEGHDLIITVPLA 232
            G+ DG+ +RLKG+GA G G G  GD  + I + P   F  +G D+ I +P++
Sbjct: 161 PGILDGQTLRLKGKGAAGMGKGGPGDALIEIEVKPDARFTRDGDDITIDLPIS 213



 Score = 31.2 bits (69), Expect = 2e-05
 Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 5/92 (5%)

Query: 201 GANGDLFLTI-RMAPHPLFDVEGHDLIITVPLAPWEAALGA--KVAVPTLDGKINLTIRP 257
           G N D+F  + R       +  G DL+  + ++  ++  G   ++ +P   G +++TI P
Sbjct: 103 GGNDDVFADLFRRNAEARANRRGQDLLYRLAISFADSVTGVSQRLTLPG-GGTLDVTIPP 161

Query: 258 DSQSGQRLRVPGKGLANK-QGERGNLYAQLKV 288
               GQ LR+ GKG A   +G  G+   +++V
Sbjct: 162 GILDGQTLRLKGKGAAGMGKGGPGDALIEIEV 193