Pairwise Alignments

Query, 319 a.a., Curved DNA-binding protein from Pseudomonas putida KT2440

Subject, 375 a.a., Chaperone protein DnaJ from Pseudomonas putida KT2440

 Score =  190 bits (483), Expect = 4e-53
 Identities = 128/366 (34%), Positives = 180/366 (49%), Gaps = 76/366 (20%)

Query: 1   MDFKDYYKILGVEPTADEKAIKAAYRKLARKYHPDVSK-ERDAEEKFKEANEAYEVLGDA 59
           M  +DYY++LGVE  A E  +K AYR+LA KYHPD +  ++++E+KFKEANEAYEVL DA
Sbjct: 1   MSKRDYYEVLGVERGATEADLKKAYRRLAMKYHPDRNPGDKESEDKFKEANEAYEVLSDA 60

Query: 60  QKRAEFDEIRKYGGQHGRPFQAPPGWESRGGGGGFEGGDFSDFFSSIFGGRSAGGNPFGG 119
            KRA FD+   YG     P          GGG GF G +FSD F  +F     GG   GG
Sbjct: 61  SKRAAFDQ---YGHAGVDPSMG-------GGGAGFGGANFSDIFGDVFSDFFGGGGRGGG 110

Query: 120 ARQQQRSAGRRGQDVELELAVFLEETLSKESKQISFQVP------QTNAMGQRTGFTTKT 173
                R   +RG D+   L + LEE +      +S +VP        +  G + G T  T
Sbjct: 111 -----RGGAQRGSDLRYTLELNLEEAV--RGTTVSIRVPTLVNCQPCDGSGAKKGSTPST 163

Query: 174 ---------------------------------------------------LNVRIPAGV 182
                                                              L+V++PAGV
Sbjct: 164 CPTCGGIGQVRMQQGFFSVQQTCPRCHGQGKIITDPCTSCHGEGRVEEYKTLSVKVPAGV 223

Query: 183 TDGERIRLKGQGAPGSGGGANGDLFLTIRMAPHPLFDVEGHDLIITVPLAPWEAALGAKV 242
             G+RIRL G+G  G+ GG  GDL++ I +  H +F  +G  L   VP++  +AALG ++
Sbjct: 224 DTGDRIRLSGEGEAGTHGGPTGDLYVVISVREHEIFQRDGKHLYCEVPISYTDAALGGEL 283

Query: 243 AVPTLDGKINLTIRPDSQSGQRLRVPGKGLAN-KQGERGNLYAQLKVVMPPASDESAREL 301
            VPTLDG++ L I   +Q+G++ R+ GKG+A  + G  G+L  ++ V  P       REL
Sbjct: 284 EVPTLDGRVKLKIPEGTQTGKQFRLRGKGVAPVRGGGAGDLLCRVAVETPVNLSRRQREL 343

Query: 302 WTKLSE 307
             +L +
Sbjct: 344 LEELRD 349