Pairwise Alignments

Query, 319 a.a., Curved DNA-binding protein from Pseudomonas putida KT2440

Subject, 383 a.a., molecular chaperone DnaJ from Magnetospirillum magneticum AMB-1

 Score =  174 bits (442), Expect = 2e-48
 Identities = 130/381 (34%), Positives = 181/381 (47%), Gaps = 79/381 (20%)

Query: 1   MDFKDYYKILGVEPTADEKAIKAAYRKLARKYHPDVSK-ERDAEEKFKEANEAYEVLGDA 59
           M  +DYY++LGVE  A    IK AYRK A ++HPD +    DAE+KFKE NEAY+VL D 
Sbjct: 1   MSKQDYYELLGVEKGASPDDIKKAYRKQAMQFHPDRNPGNADAEQKFKEINEAYDVLKDE 60

Query: 60  QKRAEFDEIRKYGGQHGRPFQAPPGWESRGGGGGFEGGDFSDFFSSIFGGRSAGGNPFGG 119
           QKRA +D   ++G  H    Q  PG    GG GGF GG FSD F  +FG    G    GG
Sbjct: 61  QKRAAYD---RFG--HAAFEQGGPGGGGGGGFGGFGGGGFSDIFDEMFGEFMGG----GG 111

Query: 120 ARQQQRSAGRRGQDVELELAVFLEETLSKESKQISFQVPQT------------------- 160
            R Q      RG D+   + + LE+  +   K  + +VP +                   
Sbjct: 112 RRGQSTG---RGADLRYNMDISLEDAFA--GKTATVKVPSSAPCEDCKGTGGKDGAQPVT 166

Query: 161 -------NAMGQRTGFTT-------------------------------KTLNVRIPAGV 182
                    + Q+ GF T                               KTL V IPAGV
Sbjct: 167 CSACHGHGKVRQQQGFFTIERTCPTCQGMGKIIKDPCRSCGGSGRTRKEKTLQVNIPAGV 226

Query: 183 TDGERIRLKGQGAPGSGGGANGDLFLTIRMAPHPLFDVEGHDLIITVPLAPWEAALGAKV 242
            DG RIRL G+G  G  G   GDL++ + +A H +F  +G ++   VP+    AALG  +
Sbjct: 227 EDGTRIRLAGEGEAGMRGAPAGDLYIFLSIAAHRIFQRDGANIFCRVPIPMTTAALGGTI 286

Query: 243 AVPTLDG-KINLTIRPDSQSGQRLRVPGKGLA-NKQGERGNLYAQLKVVMPPASDESARE 300
            VPT+DG K  +TI   +Q+G + R+  KG++  +   RG+++ Q  V  P    +  +E
Sbjct: 287 EVPTIDGSKAKVTIPEGTQTGNQFRLRSKGMSVLRSPARGDMFIQAVVETPVNLTKRQKE 346

Query: 301 LWTKLS-----EKAAFNPRTQ 316
           L  + +     EKA  +P +Q
Sbjct: 347 LLNEFNEAGEGEKAKNSPESQ 367