Pairwise Alignments

Query, 319 a.a., Curved DNA-binding protein from Pseudomonas putida KT2440

Subject, 378 a.a., molecular chaperone DnaJ from Dickeya dianthicola ME23

 Score =  197 bits (500), Expect = 4e-55
 Identities = 132/361 (36%), Positives = 189/361 (52%), Gaps = 73/361 (20%)

Query: 4   KDYYKILGVEPTADEKAIKAAYRKLARKYHPDVSK-ERDAEEKFKEANEAYEVLGDAQKR 62
           +DYY+ILGV   ADE+ IK AY++LA KYHPD +  ++DAE KFKE  EAYE+L DAQKR
Sbjct: 4   QDYYEILGVAKDADEREIKKAYKRLAMKYHPDRNPGDKDAEAKFKEVKEAYEILTDAQKR 63

Query: 63  AEFDEIRKYGGQHGRPFQAPPGWESRGGGGGFEGGDFSDFFSSIFGGRSAGGNPFGGARQ 122
           A +D       Q+G       G    GG G F G DF D F  +F      G+ FGG R+
Sbjct: 64  AAYD-------QYGHAAFEQGGGGGAGGAGSFGGADFGDIFGDVF------GDIFGGGRR 110

Query: 123 QQRSAGRRGQDVELELAVFLEETLSKESKQI-------------SFQVPQTNAM------ 163
           Q+ S   RG D+   + + LEE +   +K+I             S   P +NA+      
Sbjct: 111 QRAS---RGSDLRYTMELTLEEAVRGVTKEIRIPTLQECDVCHGSGAKPGSNAVTCPTCH 167

Query: 164 --GQ---RTGFTT-------------------------------KTLNVRIPAGVTDGER 187
             GQ   R GF T                               KTL+V+IPAGV  G+R
Sbjct: 168 GNGQVQMRQGFFTVQQTCPHCHGRGKIIKDPCTKCHGHGRVEKSKTLSVKIPAGVDTGDR 227

Query: 188 IRLKGQGAPGSGGGANGDLFLTIRMAPHPLFDVEGHDLIITVPLAPWEAALGAKVAVPTL 247
           IRL G+G  G  G   GDL++ +++  HP+F  E ++L   VP+    AALG ++ VPTL
Sbjct: 228 IRLAGEGEAGEFGAPAGDLYVQVQVREHPIFQREDNNLYCEVPINFAMAALGGEIEVPTL 287

Query: 248 DGKINLTIRPDSQSGQRLRVPGKGLAN-KQGERGNLYAQLKVVMPPASDESARELWTKLS 306
           DG++ L + P++Q+G+  R+ GKG+ + + G +G+L  ++ V  P    +  ++L  +L 
Sbjct: 288 DGRVMLKVPPETQTGKLFRMRGKGVKSVRGGIQGDLLCRVVVETPVNLSDRQKQLLQELQ 347

Query: 307 E 307
           E
Sbjct: 348 E 348