Pairwise Alignments

Query, 421 a.a., putative Urea ABC transporter, periplasmic protein from Pseudomonas putida KT2440

Subject, 409 a.a., Leu/Ile/Val-binding protein from Xanthobacter sp. DMC5

 Score = 79.0 bits (193), Expect = 3e-19
 Identities = 101/384 (26%), Positives = 173/384 (45%), Gaps = 53/384 (13%)

Query: 8   KALTLSASIAAMGLSWSIQAAE--TIKVGILHSLSGTMAI-SETSLKDMALMTIEQINAK 64
           +A   +A +AA+ L+ +  AA   T+K G L+  SGT+A+  + S +   L  +E+ NA 
Sbjct: 6   RAALAAAMLAAVPLAVAQPAAAQGTVKFGALYPFSGTLALLGDESFRGFEL-AVEERNAA 64

Query: 65  GGVNGKMLEPVVVDPASNWPLFAEKSRQLLTQDKVAVVFGCWTSVSRKSVLPVFEELN-- 122
           GG+NG+ +E +  D         E +R+L + DKV+ +FG ++S    +   V E  N  
Sbjct: 65  GGLNGQKIEFIKGDAVDPNQAVGE-ARRLTSVDKVSAIFGTYSSSLSLAATQVTELANVP 123

Query: 123 ----GLLFYPVQYEGEEMSPNVFYTGAAPNQQA-------IPAVEYLMSEDGGSAKRFFL 171
               G +  P+   G +    VF T A     A       I A+   ++   G  K   +
Sbjct: 124 YFELGAISDPITERGFKY---VFRTNATARDFANRMVDSIIEAIAPALNAKPGDLK-IGI 179

Query: 172 LGTDYVYPRTTNKILRAFLHSKGVADKDIEEVYTPFGHADYQTIVASIKKFSAGGKTAVI 231
           +  D +Y +T +   ++    KG+   ++ EV  P+  A    +   I +  + G   V+
Sbjct: 180 IHEDSLYGQTVSGYQKSRAKEKGL---NVVEVL-PYS-AKSVDLTPVILRLKSAGADVVL 234

Query: 232 STVNGDSNVPFYKELANQGLKATDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFESVD- 290
            T   +  V F++++ +QG K    P      G     G  T+  +  + A N   ++D 
Sbjct: 235 QTSYQNDTVLFFRQMKDQGYK----PKAVMGAGG----GYSTRDTMQAVGAENMEGALDV 286

Query: 291 -------NPVNQKFVADWKAYAKAK-GL-PGADKAVTNDPMEATYVGIHMWAQAVEKAKS 341
                  NP     + ++ A  KAK G+ P +  ++ N      Y+G  ++  A+  AKS
Sbjct: 287 DFTQYNTNPKAAPGITEFAAKYKAKYGIEPRSGHSLAN------YMGAKVFFDAIASAKS 340

Query: 342 TDVDKVREALAGQSFEAPSGFTLT 365
           TD DKVR A+   + + P G T T
Sbjct: 341 TDADKVRAAVL--AVDIPVGQTAT 362