Pairwise Alignments

Query, 421 a.a., putative Urea ABC transporter, periplasmic protein from Pseudomonas putida KT2440

Subject, 390 a.a., Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein from Xanthobacter sp. DMC5

 Score = 71.6 bits (174), Expect = 4e-17
 Identities = 78/300 (26%), Positives = 132/300 (44%), Gaps = 22/300 (7%)

Query: 4   RSLIKALTLSASIAAMGLSWSIQAAETIKVGILHSLSGTMAISETSLKDMALMTIEQINA 63
           + L+ +  L  ++A  G +    AAE +KVG++ +LSG  A+    ++D  L+ ++++  
Sbjct: 4   KGLLASTALLGTLALSGAA----AAEPVKVGLVSTLSGPSAVLGQHMRDGFLLAVKELGG 59

Query: 64  KGGVNGKMLEPVVVDPASNWPLFAEKSRQLLTQDKVAVVFG-CWTSVSRKSVLPVFEELN 122
           K G  G+  E +VVD      +  +K + LL +DKV  V G  +++V      PV     
Sbjct: 60  KLG--GQETEVIVVDDELKPDIAVQKVKGLLERDKVDFVAGVVFSNVMGAVAKPVTANET 117

Query: 123 GLL---FYPVQYEGEEMSPNVFYTGAAPNQQAIPAVEYLMSEDGGSAKRFFLLGTDYVYP 179
            L+     P    G   SP  F++ +  N Q    +     + G   K+  L+  +Y   
Sbjct: 118 FLISGNAGPSTIAGAGCSP-FFFSASYQNDQNHEVLGKYAQDKG--FKKVVLIAPNYQAG 174

Query: 180 RTTNKILRAFLHSKGVADKDIEEVYTPFGHADYQTIVASIKKFSAGGKTAVISTVNGDSN 239
           + +    + +   + VAD    E+YT  G  D+    A + K +A    AV + + G   
Sbjct: 175 KDSLAGFKRYYKGE-VAD----EIYTQLGQLDFS---AELAKIAAAKPDAVFTFMPGGMG 226

Query: 240 VPFYKELANQGLKATDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFESVDNPVNQKFVA 299
           V   K+    GL  T   + AF+V E  L       L G  +   +   +D P N+ FVA
Sbjct: 227 VNLVKQYRQAGLADTTPFLSAFTVDETTLPATGEAAL-GFFSGAAWAPDLDTPANKAFVA 285