Pairwise Alignments

Query, 421 a.a., putative Urea ABC transporter, periplasmic protein from Pseudomonas putida KT2440

Subject, 386 a.a., Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein from Xanthobacter sp. DMC5

 Score = 80.5 bits (197), Expect = 8e-20
 Identities = 93/369 (25%), Positives = 147/369 (39%), Gaps = 31/369 (8%)

Query: 1   MKRRSLIKALTLSASIAAMGLSWSIQAAETIKVGILHSLSGTMAISETSLKDMALMTIEQ 60
           M RR+ + AL  S       L+ +  AA+TIK+G+   L+G  A S T + + A +  ++
Sbjct: 3   MSRRTTLAALAFSL------LAGTAFAADTIKIGVNEPLTGAFAASGTYVVNGAKIAADE 56

Query: 61  INAKGGVNGKMLEPVVVDPASNWPLFAEKSRQLLTQDKVAVVFGCWTSVSRKSVLPVFEE 120
           INAKGG+ GK +E V+ D  SN    A  + +L+T DKV V+ G W S    + +P  EE
Sbjct: 57  INAKGGILGKKVELVIEDNKSNPTEAASVAEKLITSDKVPVLMGAWGSSLTLATMPKLEE 116

Query: 121 LNGLLFYPVQYEGE-EMSPNVF-YTGAAPNQQAIPAVEYLMSEDGGSAKRFFLLGTDYVY 178
            +  +       G+   S N F +  + P+     A E  + + G     F ++  D  +
Sbjct: 117 YSVPMLVETSSSGKITTSGNPFIFRISPPSSVEAEAFEPSVKKLGLKKVDFLVINND--W 174

Query: 179 PRTTNKILRAFLHSKGVADKDIEEVYTPFGHADYQTIVASIKKFSAGGKTAVISTVNGDS 238
            R         L + GV    +E +         Q + A + K  A     ++ T   D 
Sbjct: 175 GRGAAADFSKMLKANGVEVGLVETM-----DQSAQDMSAQLAKLKASDADTIMVTSAVDQ 229

Query: 239 NVPFYKELANQGLKATDVPVVAFS-----VGEEELRGIDTKPLVGHLAAWNYFESVDNP- 292
               +K++A  GLK   +           + +       T  L   L  W   E   NP 
Sbjct: 230 LTLLFKQMAALGLKKRIITTGGSQNPDQIIAQAGAAADGTMHLTTFLPWWP--EKTPNPE 287

Query: 293 VNQKFVADWKAYAKAKGLPGADKAVTNDPMEATYVGIHMWAQAVEKAKSTDVDKVREALA 352
               F+ +WK         G D A   +     Y GI   A A+     TD   +++   
Sbjct: 288 ATAYFLGEWKK-------RGFDFAGATESFRG-YDGIRTVAAAIAAGGGTDPASIQKGFW 339

Query: 353 GQSFEAPSG 361
              F   +G
Sbjct: 340 KVDFMGLNG 348