Pairwise Alignments

Query, 421 a.a., putative Urea ABC transporter, periplasmic protein from Pseudomonas putida KT2440

Subject, 426 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 82.4 bits (202), Expect = 2e-20
 Identities = 87/354 (24%), Positives = 162/354 (45%), Gaps = 40/354 (11%)

Query: 3   RRSLIKALTLSASIAAMGLSWSIQA-AETIKVGILHSLSGTMAISETSLKDMALMTIEQI 61
           RR+L+K +  +A +  +G+   ++A A+T+  G L  L+G +       +    + +E++
Sbjct: 17  RRTLLKGVGAAALLGGVGMPAIVKAQADTVTFGHLTPLTGFLGPLGAYGQMGVQLAVEEL 76

Query: 62  NAKGGVNGKMLEPVVVDPASNWPLFAEKSRQLLTQDKVAVVFGCWTSVSRKSVLPVFEEL 121
           NA GG+NG+ +  +V++ + N    + K+ + + +DK AV+ G  +S S  ++  V    
Sbjct: 77  NAAGGINGRKIN-LVMEDSVNPATASSKAERYIERDKAAVIVGEISSASALAIAQVAAR- 134

Query: 122 NGLLFYPV-----QYEGEEMSPNVFYTGAAPNQQAIPAVEYLMSEDG-GSAKRFFLLGTD 175
           N ++F           G++ +  +F+   A N Q + AV   M  DG    K+ F L  D
Sbjct: 135 NKIVFVNTGGNSDALRGKDCNRYMFHVEGA-NTQYVKAVGAAMLRDGLIKGKKLFFLTAD 193

Query: 176 YVYPRTTNKILRAFLHSKGVADKDIEEVYTPFGHADYQTIVASIKKFSAGGKTAVISTVN 235
           Y +    +++ + ++   G   + + +   P    D+   +  +++        VIS + 
Sbjct: 194 YAFGHDLSRVAKRYIAQNG--GEVVADELVPTDATDFSPYLLKVRQ---ARPDVVISNLA 248

Query: 236 GDSNVPFYKELANQGLK------ATDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFESV 289
           G+    F K+ +  GLK        D   VA+  G++   GI   PL+ H         V
Sbjct: 249 GNQITNFIKQYSEFGLKYPFGGFGFDT-AVAWGAGKDAFGGI--WPLIWH-------HDV 298

Query: 290 DNPVNQKFVADWKAYAKAKGLPGADKAVTNDPMEATYVGIHMWAQAVEKAKSTD 343
             P ++ FVA   A+ K  G P  ++A         YV   + A+A+ + KSTD
Sbjct: 299 SAPSSKAFVA---AFVKKWGKPPENQA------WGDYVATKLVARAMIETKSTD 343