Pairwise Alignments

Query, 421 a.a., putative Urea ABC transporter, periplasmic protein from Pseudomonas putida KT2440

Subject, 415 a.a., Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein from Xanthobacter sp. DMC5

 Score = 82.8 bits (203), Expect = 2e-20
 Identities = 83/342 (24%), Positives = 147/342 (42%), Gaps = 29/342 (8%)

Query: 28  AETIKVGILHSLSGTMAISETSLKDMALMTIEQINAKGGVNGKMLEPVVVDPASNWPLFA 87
           A+TI++G    L+G            A + ++ +N KGG+ G+ +E +V D   N    A
Sbjct: 39  ADTIRIGFPTPLTGPFGAEAKDQVKSAELAVKLVNDKGGIAGRKVELLVRDDKLNAGEAA 98

Query: 88  EKSRQLLTQDKVAVVFGCWTSVSRKSVLPVFEELNGLLFYPVQY-----EGEEMSPNVFY 142
            ++ +L+ +DKV  V G  +S  + +V  V     G+++  +       E ++ S   F+
Sbjct: 99  TRTLELIEKDKVHAVVGALSSAVQLAVNEV-TRARGVIYVSISQSDTINEVKDFSKYTFH 157

Query: 143 TGAAPNQQAIPAVEYLMSEDGGSAKRFFLLGTDYVYPRTTNKILRAFLHSKGVADKDI-E 201
               P+            +      +  LLG DY Y    ++++R F  + G    +I  
Sbjct: 158 EALNPHMTTAAVARATFKK----GSKVALLGADYAY---GHEMMRGFKRAAGELGAEIVG 210

Query: 202 EVYTPFGHADYQTIVASIKKFSAGGKTAVISTVN-GDSNVPFYKELANQGLKATDVPVVA 260
           E+  PFG ADY T++  I+      K  +++  N G       K+  + G+K     VV 
Sbjct: 211 EILHPFGAADYSTLMPRIRSL----KPDILAICNFGRDQANSIKQANDFGMKKQMQIVVP 266

Query: 261 FSVGEEELRGIDTKPLVGHLAAWNYFESVDNPV-NQKFVADWKAYAKAKGLPGADKAVTN 319
             +  + +  +      G +   NY+ +++N + + K   D  AY  A G      ++  
Sbjct: 267 VLLHNQRI-AVAPDVFEGIIGGANYYWALENTIPSAKAFND--AYKAAYG------SLPT 317

Query: 320 DPMEATYVGIHMWAQAVEKAKSTDVDKVREALAGQSFEAPSG 361
           D     + G+     A+ KA  TD DKV EAL G  ++   G
Sbjct: 318 DYGAYGFTGVSALLLAMAKAGGTDTDKVVEALEGLKYDVAKG 359