Pairwise Alignments

Query, 421 a.a., putative Urea ABC transporter, periplasmic protein from Pseudomonas putida KT2440

Subject, 400 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 68.2 bits (165), Expect = 4e-16
 Identities = 83/370 (22%), Positives = 148/370 (40%), Gaps = 32/370 (8%)

Query: 1   MKRRSLIKALTLSASIAAMGLSW-SIQAAETIKVGILHSLSGTMAISETSLKDMALMTIE 59
           M+RR+L+KA   +A+  ++ LS  S  AAE      L S+SG  A S     DM      
Sbjct: 1   MQRRTLLKASLTAAAALSLPLSIRSAFAAEPFTFYGLKSMSGAFA-SYGKFADMGSRLAV 59

Query: 60  QINAKGGVNGKMLEPVVVDPASNWPLFAEKSRQLLTQDKVAVVFGCWTSVSRKSVLPVFE 119
           Q + +  V G+ L   V+D   N      K ++ + QD      GC  S S  +V    +
Sbjct: 60  QQHPQ--VLGRALNYKVIDTEGNAGKAVRKVQEAIQQDGARFFQGCTLSSSALAVAKEVD 117

Query: 120 ELNGLLFYPV---QYEGEEMSPNVFY----TGAAPNQQAIPAVEYLMSEDGGSAKRFFLL 172
           ++ G+   PV   +  G++ +   F     T  A  +  +P ++ L       AKR++ +
Sbjct: 118 KVGGVFMTPVGADEVTGKDCNLATFRWSVPTYGAIRETMVPLIKLL-----PDAKRWYTI 172

Query: 173 GTDYVYPRTTNKILRAFLHSKGVADKDIEEVYTPFGHADYQTIVASIKKFSAGGKTAVIS 232
              YV+     +  +  L   G     +E +   +     Q     +    A     ++ 
Sbjct: 173 TPQYVFGEALLEGAKNVLKENG-----LEHIGNSYHSLQEQEFSGYLTNAIAAKPDVLVL 227

Query: 233 TVNGDSNVPFYKELANQGLKATDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFESVDNP 292
              G  +    ++  N G+K     ++ +S G ++ + + +  L G      Y+  VD P
Sbjct: 228 LNFGSQSSNTLRQAVNFGIKERMKVLLVWSAGLDQFQELGSDVLEGVYLGAQYWHQVDTP 287

Query: 293 VNQKFVADWKAYAKAKGLPGADKAVT-NDPMEATYVGIHMWAQAVEKAKSTDVDKVREAL 351
           +N++ V           L  A   +    P+ A Y+   +    +    S D   V +A+
Sbjct: 288 LNRELVK----------LTQAQYGINPTYPLAADYISTKIMLDTIIATGSFDGPTVAKAM 337

Query: 352 AGQSFEAPSG 361
            G S+E P+G
Sbjct: 338 QGLSYEGPTG 347