Pairwise Alignments

Query, 421 a.a., putative Urea ABC transporter, periplasmic protein from Pseudomonas putida KT2440

Subject, 401 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score = 62.4 bits (150), Expect = 2e-14
 Identities = 82/367 (22%), Positives = 157/367 (42%), Gaps = 27/367 (7%)

Query: 27  AAETIKVGILHSLSGTMAISETSLKDMALMTIEQINAKGGVNGKMLEPVVVDPASNWPLF 86
           A   IK+G ++S     A  E   K M L  +++INAKGG+NGK +E +  D  +N    
Sbjct: 25  AQGVIKIGEINSYKAQPAFLEPYKKGMEL-AVDEINAKGGINGKKIELISRDDNANPGDA 83

Query: 87  AEKSRQLLTQDKVAVVFGCWTSVSRKSVLPVFEELNGLLFYPVQYEGEEMSPNVFYT-GA 145
              + +L++++K+ V+ G + S +  ++    ++     FY      E ++  + ++ G 
Sbjct: 84  VRVAEELISREKIDVLAGAFLSNTGLALADFAKQKK--FFY---LAAEPLTDKIVWSNGN 138

Query: 146 APNQQAIPA----VEYLMSEDGG-SAKRFFLLGTDYVYPRTTNKILRAFLHSKGVADKDI 200
               +  P+    V  L+ E      KR+ ++  +Y Y +++    +  L +     + +
Sbjct: 139 KYTYRLRPSTYMQVAMLVPEAAKLKKKRWAVVYPNYEYGQSSVATFKTLLKAAQPDVEFV 198

Query: 201 EEVYTPFGHADYQTIVASIKKFSAGGKTAVISTVNGDSNVPFYKELANQGLKATDVPVVA 260
            E   P G  D  ++V ++   +     A+ + + G     F +E   +GL   D  VV+
Sbjct: 199 AEQAPPLGKVDSGSVVQAL---ADAKPDAIFNVLFGADLSKFVREGNTRGL-FKDREVVS 254

Query: 261 FSVGEEE-LRGIDTKPLVGHLAAWNYFESVDNPVNQKFVADWKAYAKAKGLPGADKAVTN 319
              GE E L  +  +   G +     +  V  P ++ F+  ++  AK K  P     V  
Sbjct: 255 VLTGEPEYLDPLKDEAPNGWIVTGYPWYGVKTPEHKAFLDAYQ--AKFKDYPRLGSVV-- 310

Query: 320 DPMEATYVGIHMWAQAVEKAKSTDVDKVREALAGQSFEAPSGFTLTMDKTNHHLHKPVMI 379
                 Y  IH     ++KA  TD +K+  A  G   + P G  +     ++       +
Sbjct: 311 -----GYSAIHSIVAGIQKAGGTDTEKLVAAFKGLQVDTPFG-KINYRAQDNQSTMGAYV 364

Query: 380 GEIQDDG 386
           G+ ++DG
Sbjct: 365 GKTKNDG 371