Pairwise Alignments

Query, 421 a.a., putative Urea ABC transporter, periplasmic protein from Pseudomonas putida KT2440

Subject, 401 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score = 58.2 bits (139), Expect = 5e-13
 Identities = 71/299 (23%), Positives = 127/299 (42%), Gaps = 24/299 (8%)

Query: 12  LSASIAAMGLSWSIQA-AETIKVGILHSLSGTMAISETSLKDMALMTIEQINAKGGVNGK 70
           LS  +    L  ++QA A  +KVG+   +SG  A      +D   + I+Q+  K G  G+
Sbjct: 16  LSLLLCGAALGTAVQAVAAPVKVGLALDISGPFAALGAEARDGFALGIKQLGGKLG--GQ 73

Query: 71  MLEPVVVDPASNWPLFAEKSRQLLTQDKVAVVFGCWTSVSRKSVLPVFEELNGLLFY--- 127
            +E V  D A +     +   +++ +DK+ +  G   S    +V P     N  + Y   
Sbjct: 74  DVEFVQADMAGSPDQAKQLVDRMIQRDKIDLFSGPIGSNVALAVGPTL--FNAKVPYLSA 131

Query: 128 ---PVQYEGEEMSPNVFYTGAAPNQQAIPAVEYLMSEDGGSAKRFFLLGTDYVYPRTTNK 184
              P Q+ G +   N ++ G A             ++D  + K+  L+  +Y  P   + 
Sbjct: 132 NAGPSQFAGAQC--NAYFFGTAYQNDQFHEAAGKFAQDR-AFKKIVLIAPNY--PAGKDA 186

Query: 185 ILRAFLHSKG-VADKDIEEVYTPFGHADYQTIVASIKKFSAGGKTAVISTVNGDSNVPFY 243
           +       KG VAD    E+YT  G  DY   +A ++   A    ++   + G   + F 
Sbjct: 187 LGGFKRQFKGQVAD----ELYTKLGQIDYAAELAQLR---AAKPDSIYFFLPGAMGINFI 239

Query: 244 KELANQGLKATDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFESVDNPVNQKFVADWK 302
           K+    GL      V +    +E++ G   +P++G     ++   +DNP N+ FVA ++
Sbjct: 240 KQFVGAGLSKDITLVTSGFSADEDVIGAVGEPMLGLFNTSHWAHDLDNPANKAFVAAFR 298