Pairwise Alignments

Query, 421 a.a., putative Urea ABC transporter, periplasmic protein from Pseudomonas putida KT2440

Subject, 393 a.a., Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) from Variovorax sp. SCN45

 Score = 76.3 bits (186), Expect = 2e-18
 Identities = 96/399 (24%), Positives = 160/399 (40%), Gaps = 27/399 (6%)

Query: 6   LIKALTLSASIAAMGLSWSIQAAETIKVGILHSLSGTMAISETSLKDMALMTIEQINAKG 65
           +IK L L+A+ AA+ L     A   IK+G+++  +G  A+S   + D A   +EQ+NA+G
Sbjct: 1   MIKKL-LAAAAAAVVLQSGALAQNAIKLGVVNIDTGPFAVSGAFVNDGAAFAVEQLNAQG 59

Query: 66  GVNGKMLEPVVVDPASNWPLFAEKSRQLLTQDKVAVVFGCWTSVSRKSVLPVFEELNGLL 125
           G  G+  E V  + A         + +L+ Q  V+   G   S +  ++      LN L 
Sbjct: 60  GALGRKYELVTQNHAGTPASAIAAATRLVEQQGVSFFTGLNPSGTSLAIASKMPGLNALF 119

Query: 126 FYPV----QYEGEEMSPNVFYTGAAPNQQAIPAVEYLMSEDGGSAKRFFLLGTDYVYPRT 181
                      G+    N F  G       +    +         K + LL  D      
Sbjct: 120 IDATAASDDLTGKNCGANYFRVGIT---DGMMVNSFREQTKASGIKNWDLLMADIAVGHD 176

Query: 182 TNKILRAFLHSKGVADKDIEEVYTPFGHADYQTIVASIKKFSAGGKTAVISTVNGDSNVP 241
           T K   A +   G   K  + ++ P   +D  + +A +    A G      +  G   + 
Sbjct: 177 TAKRFAAAMQESG--GKVNKTLFAPITASDLGSYIAQLLDKPADGLLMYYPSSGG---IA 231

Query: 242 FYKELANQGLKATDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFESVDNPVNQKFVADW 301
             K+     L      V++ S+  E L G      VG  +A +YF S+    N  FV  +
Sbjct: 232 LVKQQQAFKLFEKYKTVLSASMVNEILIGAHGDASVGLWSAQSYFWSMPGDRNAAFVKAF 291

Query: 302 KA-YAKAKGLPGADKAVTNDPMEATYVGIHMWAQAVEKAKSTDVDKVREALAGQSFEAPS 360
           +A Y +      AD           Y+   +  QA+ KAKS DV  VR AL+G       
Sbjct: 292 EARYKRKPTYIDAD----------AYMSFELVHQAILKAKSADVPAVRAALSGLKASTVV 341

Query: 361 GFTLTMDKTNHHLHKPVMIGEI--QDDGQFSVVWETEQP 397
           G  + M   +H L +P+++ +     +G+  +V ++ +P
Sbjct: 342 G-DVEMRAADHQLLRPLVVVQAAKASEGKGEIVMKSIEP 379