Pairwise Alignments

Query, 421 a.a., putative Urea ABC transporter, periplasmic protein from Pseudomonas putida KT2440

Subject, 408 a.a., Branched-chain amino acid ABC transporter, substrate-binding protein LivJ (TC 3.A.1.4.1) from Variovorax sp. SCN45

 Score = 70.1 bits (170), Expect = 1e-16
 Identities = 88/379 (23%), Positives = 154/379 (40%), Gaps = 27/379 (7%)

Query: 10  LTLSASIAAMGLSWSIQAAETIKVGILHSLSGTMAISETSLKDMALMTIEQINAKGGVNG 69
           L L+  +A    + +  A   IK+G+L   +G  A   + ++D +   ++ +NA+GG  G
Sbjct: 18  LALTVPLAMQAQAQAQTATGPIKIGVLTIDAGPFATYASLVEDSSRAAVDMLNAEGGALG 77

Query: 70  KMLEPVVVDPASNWPLFAEKSRQLLTQDKVAVVFGCWTSVSRKSVLPVFEELNGLLFYPV 129
           +  E VV   A           +L+ Q  V+ V G   +    ++ P    LN L+   V
Sbjct: 78  RKFEVVVQSHAGTPSSAIAAVNRLVQQGGVSFVTGQTPTSHSLAISPKLAALNALMI-DV 136

Query: 130 QYEGEEM-----SPNVFYTGAAPNQQAIPAVEYLMSEDGGSAKRFFLLGTDYVYPRTTNK 184
             +G+++      PN F      +  A    E++       AK + L+  DY    T   
Sbjct: 137 YSQGDDLMTKACQPNFFRVTTPDSVYAAMLREFVKK---SGAKTWNLISPDYAVGHTFAA 193

Query: 185 ILRAFLHSKGVADKDIEEVYTPFGHADYQTIVASIKKFSAGGKTAVISTVNGDSNVPFYK 244
                + ++G   +    ++   G  D+ + +  + K       A++ T+       F K
Sbjct: 194 KFSDIVKAQGGTVQ--MSLFAAQGTNDFGSYITQLAK----PADALMVTLYMSDGNSFAK 247

Query: 245 ELANQGLKATDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFESVDNPVNQKFVADWKAY 304
           +    GL      V+      E         ++G L   +Y  ++    N  FV  ++A 
Sbjct: 248 QQKQFGLFDKYKTVLGNGFATEFQLAAQGDSVLGVLNGLSYHNTMPGERNAAFVKSYEAR 307

Query: 305 AKAKGLPGADKAVTNDPMEATYVGIHMWAQAVEKAKSTDVDKVREALAGQSFEAPSGF-T 363
            K K +       T+  M    V + M   A+ KAKSTDV  VR ALAG   +AP+ F  
Sbjct: 308 FKRKPI------YTDADM---MVALEMLRAAIVKAKSTDVSAVRTALAG--LKAPTVFGE 356

Query: 364 LTMDKTNHHLHKPVMIGEI 382
           + M   +H L + + + E+
Sbjct: 357 VEMRAADHTLIRQLGVAEV 375