Pairwise Alignments

Query, 421 a.a., putative Urea ABC transporter, periplasmic protein from Pseudomonas putida KT2440

Subject, 397 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score = 63.2 bits (152), Expect = 1e-14
 Identities = 87/368 (23%), Positives = 151/368 (41%), Gaps = 26/368 (7%)

Query: 1   MKRRSLIKALTLSASIAAMGLSWSIQAAETIKVGILHSLSGTMAISETSLKDMALMTIEQ 60
           M +R+++  L L AS   +G + +  A E +++G++ + SG  A           + +++
Sbjct: 3   MTKRTILSTLLL-ASFGVLGTTAAQAADEPLRIGLIATYSGPYADYGRQFDAGIALYLKE 61

Query: 61  INAKGGVNGKMLEPVVVDPASNWPLFAEK-SRQLLTQDKVAVVFGCWTSVSRKSV--LPV 117
              K  V G+ +E +  D A   P  A++ +++L+ +DKV+V+ G   S +  +V  +  
Sbjct: 62  HGGK--VGGRTVEIIKKDTAGPAPDAAKRIAQELIVRDKVSVLTGLDFSPNAYAVGAIAT 119

Query: 118 FEELNGLLFYPVQYEGEEMSPNVFYTGAAPNQQAIPAVEYLMSEDGGSAKRFFLLGTDYV 177
             ++  ++           SP V        Q   P   Y++ E     K  + +  DY 
Sbjct: 120 QAKIPTIVMNAASSAITTSSPYVARLSFTVQQVTDPMARYMLKE---GIKDAYTVVADYA 176

Query: 178 YPRTTNKILRAFLHSKGVADKDIEEVYTPFGHADYQTIVASIKKFSAGGKTAVISTVNGD 237
                    +    + G   K   EV TP  + D+   V  IK   A  +       +G 
Sbjct: 177 SGVDAETAFKKTFTAGG--GKVSGEVRTPMNNPDFSAYVQRIK--DAKPQAVFFFFPSGV 232

Query: 238 SNVPFYKELANQGLKATDVPVVAFSVGE---EELRGIDTKPLVGHLAAWNYFESVDNPVN 294
               F K    +G++   + +  F+ GE   +          +G + + +Y  +  +P N
Sbjct: 233 MPPAFLKVWKERGMEQAGIKL--FATGEATDDSYLDATGDVALGLVTSHHYSFAHPSPKN 290

Query: 295 QKFVADWKAYAKAKGLPGADKAVTNDPMEATYVGIHMWAQAVEKAK-STDVDKVREALAG 353
           QKFV D+ A   AK  P        D M A  +       A+ K K  T  DK  +AL G
Sbjct: 291 QKFVKDFAADNGAKLRPSYFAVTAYDAMAAIDL-------ALAKTKGDTGGDKFMDALKG 343

Query: 354 QSFEAPSG 361
            SFE+P G
Sbjct: 344 LSFESPRG 351