Pairwise Alignments

Query, 421 a.a., putative Urea ABC transporter, periplasmic protein from Pseudomonas putida KT2440

Subject, 384 a.a., Possible regulatory protein similar to urea ABC transporter, substrate binding protein from Variovorax sp. SCN45

 Score =  220 bits (561), Expect = 5e-62
 Identities = 131/376 (34%), Positives = 204/376 (54%), Gaps = 15/376 (3%)

Query: 29  ETIKVGILHSLSGTMAISETSLKDMALMTIEQINAKGGVNGKMLEPVVVDPASNWPLFAE 88
           + I+VGIL+S +G  +    S    AL+ IE+INA GGV G+ +  V  DP SN   +A+
Sbjct: 5   DPIRVGILYSETGVTSTIGLSQLQGALLAIEEINAAGGVEGREIVAVRYDPQSNPARYAQ 64

Query: 89  KSRQLLTQDKVAVVFGCWTSVSRKSVLPVFEELNGLLFYPVQYEGEEMSPNVFYTGAAPN 148
            + +L+ QD+V V+FGC+ S SRK+V+PV E+ N LLFYP  YEG E S NV YTGAAPN
Sbjct: 65  LAEKLIVQDRVNVIFGCYMSSSRKAVIPVIEKWNKLLFYPTLYEGFEYSGNVIYTGAAPN 124

Query: 149 QQAIPAVEYLMSEDGGSAKRFFLLGTDYVYPRTTNKILRAFLHSKGVADKDIEE-VYTPF 207
           Q ++   E++ +  G    R +L+G+DY+YP  +N+I+   +  +  ++K  E  V    
Sbjct: 125 QNSVQLAEFMTTNFGA---RVYLIGSDYIYPYESNRIMGELVMQRPGSEKLGERYVALDA 181

Query: 208 GHADYQTIVASIKKFSAGGKTAVISTVNGDSNVPFYKELANQGLKATDVPVVAFSVGEEE 267
           G  DY+ I+  I+         + STV GDS    Y+  A  G     +P+ + +  E E
Sbjct: 182 GERDYRAIMDDIRD---KRPDFIFSTVVGDSTASLYRAYAEAGFDPKTMPIASLTTSEAE 238

Query: 268 LRGIDTKPLVGHLAAWNYFESVDNPVNQKFVADWKAYAKAKGLPGADKAVTNDPMEATYV 327
           +  +      GH  A  YF+S+D+  N++ +A  +A          D  V N   EA+Y 
Sbjct: 239 ISQMGHGVATGHFTAAPYFQSIDSAANRRCLAMLRARF-------GDGCVPNLCWEASYF 291

Query: 328 GIHMWAQAVEKAKSTDVDKVREALAGQSFEAPSGFTLTMDKTNHHLHKPVMIGEIQDDGQ 387
            +H++A A  +A S  + ++   + G  F+AP G  + +D TNHH      IG +   GQ
Sbjct: 292 QMHIFANAYRQAGSDGIAEILPYILGSEFDAPQGL-VKIDPTNHHTCLYPRIGRVDSHGQ 350

Query: 388 FSVVWETEQPLRAQPW 403
           F++V +  + +   P+
Sbjct: 351 FTIVRQATRAVYPDPY 366